LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi07g0890	ATGGCACATCGATTCGATCCCCCGGAAGAATCCGAGACTCCACCGGAGACTGGACAAGACTCGCCGTCATCCGGCGATGACATCTACACAACAGCACCATCTCCCAAGAAAAGGTTAATTAGATATGGGATAAAGAAGAAGGTGGTGGTGGTACCGATCGGTGACGTGGAGGGATCTAAGAGCAAAGGAGAGACATATCCACCGTCCGATTCTTGGGCTTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGCTCTCCTTATCCCAGGGGATATTACCGATGCAGTAGTTCAAAGGGTTGTCCAGCGAGGAAACAAGTAGAGAGAAGCCGTGTGGACCCCACAAAGCTCATCGTCACCTACGCCCACGACCACAACCACTCCCTCCCCGCCGCCAAGCCCCACGCCGTCGCCGCCCCCAACGACGGCGCTCCGACCCAATCGGACTCCAACCTCACGGCGTTCGCCGGCCACCCCGATCTCGATCTCGACGGCGATTACGGCCAATTCGGATGGTTCGATGACGTGGCATCGAATACCAGAGTTCTCGAAAGCCCTATCTTCGCCGGAGATCTGGAAGATGTGGCGGTCAGAGAATATAATAATGAAGAAGATGAAGATGAGTCTCTTTTTGCTGATCTCGGTGAGTTGCCGGAATGTTCCGTGGTTTTCCGGCGACGGAATATTCCCACAGAGGGTGTGATCCGGTGCGGCGGGATCACAGGGTAA	726	0.5523	MAHRFDPPEESETPPETGQDSPSSGDDIYTTAPSPKKRLIRYGIKKKVVVVPIGDVEGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAHDHNHSLPAAKPHAVAAPNDGAPTQSDSNLTAFAGHPDLDLDGDYGQFGWFDDVASNTRVLESPIFAGDLEDVAVREYNNEEDEDESLFADLGELPECSVVFRRRNIPTEGVIRCGGITG	241

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi07g0890	241	Gene3D	WRKY domain	55	130	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi07g0890	241	MobiDBLite	consensus disorder prediction	1	35	-	-
	Mibi07g0890	241	SMART	WRKY_cls	68	128	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi07g0890	241	FunFam	WRKY transcription factor 65	55	129	-	-
	Mibi07g0890	241	PANTHER	WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED	10	220	IPR044810	GO:0003700
	Mibi07g0890	241	SUPERFAMILY	WRKY DNA-binding domain	64	129	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi07g0890	241	MobiDBLite	consensus disorder prediction	14	30	-	-
	Mibi07g0890	241	Pfam	WRKY DNA -binding domain	70	126	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi07g0890	241	ProSiteProfiles	WRKY domain profile.	69	129	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi07g0890	Mibi-ChrMibi07	11529151	11532467	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi07g0890	9	231	WRKY Transcription Factor Family	AT3G58710	50.403	3.21e-69	212

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mibi07g0890		WRKY	1.4e-24	CL0274