Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0888 ATGTCCAAGTCGTATACAAATCTTTTAGATTTGGCTACAGGGAATTTCCCTGCGATGGGAAAGGAACTTAAGGAAAGGAGGCGGATGCCTAGGGCTATGAGTGTTCCTGGGATGATCTCTGAACTTGATGATACTCAGAGTGTTTCTTCTGATAATCCATCAGCTGCTTCCAATGATCGGATTATCATTGTTGCGAATCAGCTTCCTTTGAAAGGGAAGCGAAAGGAGGATAACAAAGGATGGAGTTTCAGTTGGAATGAGGATTCATTGCTTTTACAGCTAAAGGATGGTTTTCCAGAAGAGATGGAGGTTCTTTATGTTGGGTCACTGCGGGTTGATGTTGATCCTTCTGAACAGGATGATGTATCACAGTACTTGTTAGAAAAATTCAACTGTGTTCCTACTTTTCTGCCCCCTAATGTATTGGAAAAATTTTATGATGGATTTTGCAAAAGGCAGTTATGGCCACTGTTTCATTACATGTTGCCACTTTCAACTGATAAAAGCCAGCGTTTTGACCGCTCTTATTGGGAAGCCTATGTGTTGGCAAATAAACTTTTCTTTCAGAAGGTAGTTGAAATAATTAGCCCAGAGGATGATTATATTTGGATTCATGATTACCATTTGATGGTTCTGCCAAGCTTTATTAGAAGGCGCTTTAATAGGGTCAAAATAGGATTTTTCCTTCACAGTCCTTTTCCATCGTCTGAGATGTACAGGACTCTTCCTGTGAGGGAAGAGATACTAAAATCTTTGCTTAACTCTGATATTATTGGTTTCCACACCTTCGATTATGCTCGTCATTTCCTCTCCTGTTGCAGTCGTATGTTGGGCCTTGAGTATCAGTCGAAGAGGGGCTACTTAGGATTGGAATATTATGGAAGGACTATCAGTATAAAAATTATGCCAGTTGGAGTTCACATGGGTCGGATTGAATCTGTTATGAAAATGACGGATGAGGAGAGTAAGTTTAGGGAACTCAAACAAGCATACGAAGGAAAAACAGTGCTGCTTGGTGTTGATGATTTGGACATTTTTAAAGGAATTAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAAGCAACATCCTAAATGGCAAGGAAGAGCTGTGCTGATACAGATTGTAAATCCACCCAGGGGCAGAGGGATACAATTAGATGAAATCCGAGATGAGATACAAGAAAGCTGCAGCAGGATCAACAGAGTATTTGGGCGGCCTGGTTATCAGCCAATTGTTTTTATTGATAAATCAGTTCCAATTACTGAAAAAGTTGCATATTACAGGATTGCTGAGTGTGTAGTTGTTTCAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATATATTGCCTGTAGACAAGGAATATCTGATTCTGAATCAAGTTCTGATGTTAGTGGATTGAAGAAGAGTATGCTTGTAATATCTGAATTTATTGGGTGCTCTCCGTCACTCAGTGGGGCTATCCGTGTCAACCCCTGGAATGTTGAAACAACTGCAGAAGCCATGAATGAGGCCGTCTCAATGAATGATGAAGAGAAACAGTTGCGGCATGAAAAGCACTACCGGTATGTTAGTACTCATGATGTGGCTTATTGGTCACGCAGTTTCTTGCAAGATATGGAGAGGGCTTGCACAGATCTTCTAAGGAAAAGGTGTTGGGGAATAGGACTTAGTTTTGGTTTCAGAGTGGTGGCGCTTGACCCCAATTTTAAAAAGCTATCAATCGATGCCATGGTTTCAGCTTACAGGAGGGCAAGTAGCAGGGCCATTTTGTTGGATTATGATGGTACTGTAATGCCACAGAACTCCATTAATAAGAGTCCTACTCAGGAGGTTGTCTCCACCTTGAACACACTATGTGCAGACCCCAAAAATGTAGTTTTCATTGTTAGCGGAAGGGGTAGGGATAGCTTAAGCATGTGGTTTACTCCCTGTGAAAAGCTTGGTATTGCAGCAGAACATGGGTACTTCTTGAGATGGTCTCAAAGTGAACAGTGGGAAGTTGTTGGTAAGAGCTCCGAATTTGCATGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGTCAACTGATGGTTCTAGCATTGAAAAAAAGGAAAGTGCTTTAGTCTGGCAATATAGGGATGCAGACCTTGGTTTTGGGTCTTCTCAGGCCAAGGAAATGTTGGATCATCTCGAGGGTGTTTTGGCCAATGAACCTGTTGCTGTGAAGAGTGGTCAGTTCATTGTTGAAGTGAAACCCCAGGATGTGAGCAAAGGATTAGTTGCAGAAAAGATCTTTTCAACAATGGCTGAGAGAGGTAGACAGGCTGACTTTGTGTTATGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAATTAGTGGGGCCATGTCCAGAAATATTCTTGCTGGCAACTGTTCAGTATACGCTTGCACAGTTGGACAAAAACCCAGCAAAGCAAAGTATTATTTGGATGACACTACTGAAGTAATAAGCATGTTAGAATCTTTGGCTGAAGAGTCAGAAGAGGATCCAGGCAGCCCTTGA 2547 0.4154 MSKSYTNLLDLATGNFPAMGKELKERRRMPRAMSVPGMISELDDTQSVSSDNPSAASNDRIIIVANQLPLKGKRKEDNKGWSFSWNEDSLLLQLKDGFPEEMEVLYVGSLRVDVDPSEQDDVSQYLLEKFNCVPTFLPPNVLEKFYDGFCKRQLWPLFHYMLPLSTDKSQRFDRSYWEAYVLANKLFFQKVVEIISPEDDYIWIHDYHLMVLPSFIRRRFNRVKIGFFLHSPFPSSEMYRTLPVREEILKSLLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIESVMKMTDEESKFRELKQAYEGKTVLLGVDDLDIFKGINLKILAMEQMLKQHPKWQGRAVLIQIVNPPRGRGIQLDEIRDEIQESCSRINRVFGRPGYQPIVFIDKSVPITEKVAYYRIAECVVVSAVRDGMNLTPYEYIACRQGISDSESSSDVSGLKKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAVSMNDEEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYRRASSRAILLDYDGTVMPQNSINKSPTQEVVSTLNTLCADPKNVVFIVSGRGRDSLSMWFTPCEKLGIAAEHGYFLRWSQSEQWEVVGKSSEFAWMQIAEPVMKLYTESTDGSSIEKKESALVWQYRDADLGFGSSQAKEMLDHLEGVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSTMAERGRQADFVLCVGDDRSDEDMFEIISGAMSRNILAGNCSVYACTVGQKPSKAKYYLDDTTEVISMLESLAEESEEDPGSP 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0888 848 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Mibi07g0888 848 Gene3D - 589 708 IPR023214 -
Mibi07g0888 848 Gene3D - 715 845 IPR023214 -
Mibi07g0888 848 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Mibi07g0888 848 SUPERFAMILY HAD-like 590 838 IPR036412 -
Mibi07g0888 848 CDD HAD_TPP 591 830 - -
Mibi07g0888 848 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 793 IPR006379 -
Mibi07g0888 848 FunFam Alpha,alpha-trehalose-phosphate synthase 314 527 - -
Mibi07g0888 848 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
Mibi07g0888 848 Gene3D Glycogen Phosphorylase B; 314 527 - -
Mibi07g0888 848 TIGRFAM T6PP: trehalose-phosphatase 589 838 IPR003337 GO:0003824|GO:0005992
Mibi07g0888 848 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Mibi07g0888 848 Coils Coil 824 844 - -
Mibi07g0888 848 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 839 IPR001830 GO:0003824|GO:0005992
Mibi07g0888 848 Pfam Trehalose-phosphatase 593 827 IPR003337 GO:0003824|GO:0005992
Mibi07g0888 848 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Mibi07g0888 848 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 847 - -
Mibi07g0888 848 Gene3D Glycogen Phosphorylase B; 52 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0888 Mibi-ChrMibi07 11507243 11510764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0888 1 842 Trehalose Biosynthesis Gene Families AT1G06410 75.355 0.0 1342