Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0869 ATGAATAGCAACATCAATAATTCAGCTCTCTCACCTGAGTCTCGCAGAACTGGTGTTAGAGCTTCTGGTTACCATATTCCCACCCATAGAGACTCTTTTGAGGTGTCTGCTTCTCCTTCTACACGTACTATTCCTCCTCAGATGACACCAAGTCCATTGAATCCTCTGTGGTATATGGCAGATAGAAGGCAAGCAGGGCTCCACACCATATCAGAAAGTGACTCTTATGAGGTGCCTGTGTACTACCAAGCTTCTTCAAGACATGCCACTCCAGTTCATACGACACCAAATCCACAGAATCCTCCATGGTATATGGCAGATAGAAGGCATGTAGGACTCTACAGCACACCTGATGACTCTTACGATGTGCCAGTATTCTACCGATCTTCTTCTAGACAAGCCACTCCTTATTTTCAGGAAGAGAGAACATCAAATGCACTGAATCATCCTCGACTTTTGGAAGACAGTTTTCCAGCACGAAGACACATTCTCAATGGAGATACAGGAATGGGATTAAATCCTAGGCTAAGAGAAACTCACCAGCAATCGATACCACCTCGAAGATCCACAAGCCAATCAGACACACAAACTCCAAGGACAACAGAAAATCCAAGATCTAGAGCAATGAGCAAGCTGAAGAGAGAAATATACGAACCCAATAATATTCCAAGTTCAAAAATGTTAGCAAAGAAATTGAGCTTCTACTATAGAGACCCTAATAAAGGTGCTACTGCATTGAAGGAGATGGAGAACAAGGAAAAGAGGAACGAAGATGGAAAAAGTTGTGCAGTGTGCTTAGAGGATTTTGTTCCAAAACAAGAGGTAATGGTGACACCTTGCAAGCACATGTTTCATGAAGATTGTATAATGCCATGGCTGAGAAGTCAAGGTCAATGTCCAATCTGTAGATTTGTGATCTGTGAGAAGGAGAGGGAGAATCAGAATCAGATACAGATGCCATTGATGAATGATAATGAAATTGACTCAAGTTATCTAATTCCAGGCGAGCTTATGTCTATTGTTAGGGCCATGGAAGAAGTCTTTAGATTGGGACCTGATACTCACTGA 1068 0.4223 MNSNINNSALSPESRRTGVRASGYHIPTHRDSFEVSASPSTRTIPPQMTPSPLNPLWYMADRRQAGLHTISESDSYEVPVYYQASSRHATPVHTTPNPQNPPWYMADRRHVGLYSTPDDSYDVPVFYRSSSRQATPYFQEERTSNALNHPRLLEDSFPARRHILNGDTGMGLNPRLRETHQQSIPPRRSTSQSDTQTPRTTENPRSRAMSKLKREIYEPNNIPSSKMLAKKLSFYYRDPNKGATALKEMENKEKRNEDGKSCAVCLEDFVPKQEVMVTPCKHMFHEDCIMPWLRSQGQCPICRFVICEKERENQNQIQMPLMNDNEIDSSYLIPGELMSIVRAMEEVFRLGPDTH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0869 355 MobiDBLite consensus disorder prediction 23 51 - -
Mibi07g0869 355 MobiDBLite consensus disorder prediction 179 214 - -
Mibi07g0869 355 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 320 IPR013083 -
Mibi07g0869 355 PANTHER SI:CH211-59O9.10 13 308 - -
Mibi07g0869 355 MobiDBLite consensus disorder prediction 179 205 - -
Mibi07g0869 355 FunFam RING/U-box superfamily protein 246 319 - -
Mibi07g0869 355 Pfam Ring finger domain 261 303 IPR001841 -
Mibi07g0869 355 ProSiteProfiles Zinc finger RING-type profile. 262 303 IPR001841 -
Mibi07g0869 355 SMART ring_2 262 302 IPR001841 -
Mibi07g0869 355 CDD RING-H2_PA-TM-RING 262 303 - -
Mibi07g0869 355 SUPERFAMILY RING/U-box 250 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0869 Mibi-ChrMibi07 11267201 11270287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0869 203 351 C3H Transcription Factor Family AT3G58720 43.624 1.77e-37 133