Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0859 ATGGTTTCCCCGGAAAACTCAAATTGGTTTTTCGATTATGGCCTGATTGATGACATATCTGTCCCTGATGGTAATTTCACTGTCCATGCCTCTGGTTTCACTTGGCCAGCGCAAGCTTTGAATGGTTCATCAAATGTCAGCACGGAAATTGATGGCTCGTTGGGGGATTCTGATGGCCTGAAAGAGTCTGGTTCAAAGAAGAGGAGTAGATCTGATTCATGCACTGCTTCCAGCTCCAAGGCATGTCGTGAGAAATTGCGGAGGGATAGGTTGAATGACAAGTTTGTTGAATTAGGCTCCACTTTGGAGCCCGGAAAGCCTCCCAAAACAGACAAAGCTGCCATTTTGATCGATGCTGTGCGGATGGTGACACAGTTACGGGGTGAAGCCCAGAAGTTGAAAGATTCAAATGCGAGTCTTCAAGAGAAGATAAAAGAGTTGAAGGCTGAGAAGAATGAACTCCGTGATGAGAAACAGAGGCTCAAGGGAGAGAAAGAAAAGTTAGAGCAGCAGCTGAAAACCATCAATGTACAGCCTAGTTTCTTGCCTCCCCCACCTGCAATTCCTGCTGCATATGCTGCTGCACAAGGCCAAGCCCCCGGCAACAAATTGGTACCGATTATCAGTTATCCAGGAGTTGCCATGTGGCAATTTATGCCGCCAGCTGCAGTGGATACTTCACAGGATCATGTACTCCGTCCACCAGTTGCCTAA 714 0.4734 MVSPENSNWFFDYGLIDDISVPDGNFTVHASGFTWPAQALNGSSNVSTEIDGSLGDSDGLKESGSKKRSRSDSCTASSSKACREKLRRDRLNDKFVELGSTLEPGKPPKTDKAAILIDAVRMVTQLRGEAQKLKDSNASLQEKIKELKAEKNELRDEKQRLKGEKEKLEQQLKTINVQPSFLPPPPAIPAAYAAAQGQAPGNKLVPIISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0859 237 SMART finulus 81 132 IPR011598 GO:0046983
Mibi07g0859 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 146 IPR036638 GO:0046983
Mibi07g0859 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Mibi07g0859 237 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Mibi07g0859 237 MobiDBLite consensus disorder prediction 46 81 - -
Mibi07g0859 237 CDD bHLH_AtILR3_like 80 155 - -
Mibi07g0859 237 FunFam Transcription factor bHLH34 66 124 - -
Mibi07g0859 237 CDD bZIP 141 173 - -
Mibi07g0859 237 PANTHER BHLH TRANSCRIPTION FACTOR 4 237 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Mibi07g0859 237 Coils Coil 123 178 - -
Mibi07g0859 237 Gene3D - 76 153 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0859 Mibi-ChrMibi07 11175500 11178717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0859 1 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 74.477 1.22e-124 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi07g0859 HLH 9e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0859 07 11175500 11178717 Mibi07g0859 07 11175500 11178717 ECH