Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0855 ATGATGATTATTTCAAAGGTTAGCTTGTGCGTTCTTTTGGTTCTTCTCGCAACGACATCGGTTAGTTCGAAAGATACTGAAGAAACACAGGAAGATTTCCTTTGCAAACTGCTTGATCCCGCCTTTGTATTGTTTGATGAGGATACGGTACAGCAATTACGGACCAATTGCTCTGTGGATCTGATTCAATTGAAGGAAGAAGTTAGAAATCTCAACTTAAGCTTTCCACATAAATCATCATCCAGTTGCACTTATGATATTGGTTCAGAGACTCAATTTTTAGGAGAGAACATCCACAAATTGAATGCTTGCTATCCTCAGTCAAAGCAAACCTTTTGCCAATGTTTGAGAAAGAATAATCTTCGGCTCCAAGGTGTATCCAATGATGATTCCATATCGAATTGTCCAAGAAAAAAGTTGGGTTTGTGCTTGCCTCAACACGTATCCAAAACCCCTGGCCCTGGCCATACAGTTAACTCATATATACACATTCAAGACCCACAATCTCCACTGCCAAATAAATCTGGATCTTTACCTTCAAATGAGGGACCTCCCGCACCGGTGATGTATGCTAAAGATAAGAAAAAAGATGAAGAGAAGAAGAAAAGTGTTAACTATGAGGATATAGCTACTATTGCTGCAGCTTGTACGTCAGGAACGCTACTAGTGGTACTGCTCTGTGTTTTGTGTTGTCCTTGTGGTGGCAACAGGAAGGAAATTCCACTAGCATTTGCTGGTACTAATGCTGCTGCCAGGCCATCATTTGACCTGAAGCCTCCTCCTGGTAGGGTGGGAGTGAGCCCTTTGAAACCACCAACTGGAATGCTAGATCCCCTTCCCCCAGAGCCACCTTCTAGTAATTCCACTACTTCCACTCCTCCTCCTGCTGCACCCCCACAGCCACCCAAAACTGCTGCTAAGCCTCCTCCACCACCACCAGCACTACCTGGTGCCAAAAAAGGTGCTGGTGCACCACCACCACCACCTCCTCCTTCTCAGAATGGTAAAGGCCCTCCTCGACCACCTCCACCACTAGGTGTAAAGGGTCCACGCCCTTTAGTCATAGAGAAAAAAGCGAGAGCTACAGAATCTGAAGTAGCTGCTGATTCAGAAGGTGCTCAAAAGGCTAAGTTAAAACCTTTCTTCTGGGATAAGGTTCAAGCCAACTCAGATGAAACAATGGTTTGGAATCAGCTTAAAGCAGGATCATTCCAGGTTGATGAAGAAATGATGGAGACACTTTTTGGCTATGCCAATACAGATAAAAGCAATGGTGAAGTCAAGAAAAGATCTGCCTCCATGGAAAATGCACCTCAGTTTATCCAGATCATTGACGCAAAGAAAGCTCAAAATTTGTCAATTCTATTGCGAGCTTTGAATGTGACAATGGAAGAAGTTTATGATGCACTTCGTGAAGGAAATGAGCTTCCCCCAGAATTCATCCAATCCTTGCTCAAGATGGCACCCACATCTGACGAAGAACTTAAGCTTAGACTTTTCAATGGCAACCTGGCTCAACTTAGGCCTGCTGACAGGTTTCTTAAAGCCCTCGTTGATATTCCATTTGCTTTTAAACGACTGGAATCACTTCTTTTTATGGGTACTATTCAAGAGGAGCTCACCCTCACCAAGGAATCTTTTGCAGTTTTAGAGGTTGCAAGTACAGAACTAAAAGGTAGCCGACTGTTCCTGAAGCTTCTAGAAGCTGTTCTCAAAACTGGTAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAACTTGATACACTCCTTAAACTGTCTGATGTTAAAGGAGTAGATGGCAAAACTACACTCTTACACTTTGTGGTTAAAGAGATAATCCGGTCTGAGGGCATAAGAGCAGTCCGTACAACGAAAGAGAGCAAGAGTTTCTCTAGCATTAAAACAGATGACCTGCTAGAGGAAGTCTCCATGGAGTCCGAAGAGAGATATCGTGAACTCGGCCTCCAGGTGGTATCTCGATTGAGCAGTGAGCTTGAGAATGTGAAGAAAGCAGCGGCTCTAGATTCTGATGCTTTAATAGGAACCACTATAAAATTTGGTCAATCTCTCTTGAAAACCAAAGAATTCTTGAACAAAGAGCTTAAGGAGTTAGGAGGAGAAAACAAAGGAGGGTTTCATCTGACATTGGAGAGTTTTGTGGAGAATGCTGAAAGAGCTATCGTGAATCTTCTGGAAGAAGAGAAGAGAATCACATCTTTAGTGAAGAGCACAGTTGACTATTTCCATGGGAACACAGGGAGAGATGAAGGGTTAAAATTGTTTGTGATTGTACGAGACTTTTTGGTCATACTGGATAAGGTATGCAAGCAAGTTGGAGAAGAGCAGAAGAAGGCAGCAACAGCAGCAAAAGCTCATACTAAACAAGAGCTTTCCAAGGCTCCTTCTTATGATAATCTTACTCGCCCACCACCACTACAAAAGATGCTTCTTTCAGGGTTATCAGATAGGAGGATGGATGACTTTAGTTCAGATGATGAGAGTCCATAG 2523 0.4312 MMIISKVSLCVLLVLLATTSVSSKDTEETQEDFLCKLLDPAFVLFDEDTVQQLRTNCSVDLIQLKEEVRNLNLSFPHKSSSSCTYDIGSETQFLGENIHKLNACYPQSKQTFCQCLRKNNLRLQGVSNDDSISNCPRKKLGLCLPQHVSKTPGPGHTVNSYIHIQDPQSPLPNKSGSLPSNEGPPAPVMYAKDKKKDEEKKKSVNYEDIATIAAACTSGTLLVVLLCVLCCPCGGNRKEIPLAFAGTNAAARPSFDLKPPPGRVGVSPLKPPTGMLDPLPPEPPSSNSTTSTPPPAAPPQPPKTAAKPPPPPPALPGAKKGAGAPPPPPPPSQNGKGPPRPPPPLGVKGPRPLVIEKKARATESEVAADSEGAQKAKLKPFFWDKVQANSDETMVWNQLKAGSFQVDEEMMETLFGYANTDKSNGEVKKRSASMENAPQFIQIIDAKKAQNLSILLRALNVTMEEVYDALREGNELPPEFIQSLLKMAPTSDEELKLRLFNGNLAQLRPADRFLKALVDIPFAFKRLESLLFMGTIQEELTLTKESFAVLEVASTELKGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVKEIIRSEGIRAVRTTKESKSFSSIKTDDLLEEVSMESEERYRELGLQVVSRLSSELENVKKAAALDSDALIGTTIKFGQSLLKTKEFLNKELKELGGENKGGFHLTLESFVENAERAIVNLLEEEKRITSLVKSTVDYFHGNTGRDEGLKLFVIVRDFLVILDKVCKQVGEEQKKAATAAKAHTKQELSKAPSYDNLTRPPPLQKMLLSGLSDRRMDDFSSDDESP 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0855 840 SMART it6_source 368 791 IPR015425 -
Mibi07g0855 840 MobiDBLite consensus disorder prediction 165 201 - -
Mibi07g0855 840 PANTHER FORMIN-RELATED 136 828 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mibi07g0855 840 MobiDBLite consensus disorder prediction 792 840 - -
Mibi07g0855 840 MobiDBLite consensus disorder prediction 252 350 - -
Mibi07g0855 840 MobiDBLite consensus disorder prediction 273 349 - -
Mibi07g0855 840 MobiDBLite consensus disorder prediction 825 840 - -
Mibi07g0855 840 Gene3D Formin, FH2 domain 374 809 IPR042201 -
Mibi07g0855 840 MobiDBLite consensus disorder prediction 165 180 - -
Mibi07g0855 840 Coils Coil 725 745 - -
Mibi07g0855 840 ProSiteProfiles Formin homology-2 (FH2) domain profile. 368 802 IPR015425 -
Mibi07g0855 840 Pfam Formin Homology 2 Domain 373 775 IPR015425 -
Mibi07g0855 840 SUPERFAMILY Formin homology 2 domain (FH2 domain) 308 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0855 Mibi-ChrMibi07 11134218 11140373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0855 345 831 FH2 protein (formin) Gene Family AT5G54650 62.041 0.0 564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0560 01 5239745 5244947 Mibi07g0855 07 11134218 11140373 CCT
Mibi07g0855 07 11134218 11140373 Mibi07g0855 07 11134218 11140373 ECH