Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0838 ATGTGTCCATTACCGGGGAGCCAATCCAAAGGCTCGGTAATAGACATGCTAGACATCCGGCCCGGTGAGGCCTTGGCAGTGAACTTCCCGTTGCAGCTCCATCATACGGCTGATGAAAGTGTTGATGTGAATAACCCAAGGGATGGTCTGCTGAGAATGGTAAAATCATTATCTCCAAAAGTGGTCACATTGGTGGAACAAGAATCAAACACCAATACAACTCCTTTCTTCAACAGGTTCATAGAAACATTGGACTACTACCTGGCAATGTTTGAGTCCATTGATGTGACCCTTCCGAGAGACAACAAGACAAGGATTAACGTAGAACAACATTGTCTATCCAAGGATATTGTGAATGTCATTGCCTGTGAAGGGAAGGAGAGGATCGAGCGACACGAACTGTTTGGCAAGTGGAAGTCTAGGCTGACAATGGCGGGTTTTCGACAATATTCGATGAGCAGCTATGTGAATTATATTCGGTTATTAGGAGCCTGCTGA 498 0.4538 MCPLPGSQSKGSVIDMLDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLAMFESIDVTLPRDNKTRINVEQHCLSKDIVNVIACEGKERIERHELFGKWKSRLTMAGFRQYSMSSYVNYIRLLGAC 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0838 165 ProSiteProfiles GRAS family profile. 1 165 IPR005202 -
Mibi07g0838 165 Pfam GRAS domain family 14 156 IPR005202 -
Mibi07g0838 165 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 157 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0838 Mibi-ChrMibi07 10641718 10642215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0838 17 157 GRAS Transcription Factor Family AT5G48150 73.050 2.45e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi07g0838 GRAS 5e-55 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0565 01 5310043 5311803 Mibi07g0838 07 10641718 10642215 CCT
Mibi07g0838 07 10641718 10642215 Mibi07g0838 07 10641718 10642215 ECH