Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0821 ATGTCCTCCATGCCGTTGGTGCCGGACCAGCAACCACCGCTGCCGGCGGCGGCGGCGGCTTTACAACCTCCACCGCCGGCGATGGTGCCGGCGCAAGCTGAGAATGACAAGGAAATGTCAGCTACGGTCCTTGAGGGAAATGATGCAGTCACTGGCCACATAATCTCCACCACAATTGGAGGAAAAAATGGGGAACCTAAGCAGACCATCAGTTACATGGCAGAACGCGTTGTTGGGACCGGTTCATTTGGAATTGTTTTCCAGGCAAAGTGTTTGGAGACTGGGGAAGCAGTGGCTATAAAGAAGGTTTTGCAGGACAGGCGGTACAAGAATCGTGAGCTGCAGTTAATGCGTTTGATGGATCACCCAAATGTCATTTCCCTGAAGCACTGTTTCTTCTCTACCACTAGCAGAGATGAACTTTTTCTCAATTTGGTTATGGAATATGTCCCTGAAACATTGTACCGTGTTCTAAAACATTATACTAGTATGAACCAAAGGATGCCTCTCATCTATGTGAAACTCTATACATATCAAATCTTCAGGGGACTAGCATACATCCATACAGTACCAGGAGTTTGCCATAGAGATGTGAAACCTCAAAATCTTTTGGTCGATCCTCTCACGCATCAAGTTAAGCTCTGTGACTTCGGGAGTGCAAAAGTTCTGGTCAATGGTGAATCAAACATTTCATACATATGTTCACGTTACTATCGGGCTCCAGAACTAATATTTGGTGCTACAGAATACACTACCTCTATTGATGTTTGGTCAGGTGGTTGTGTCCTTGCTGAGCTGCTTCTGGGTCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATCATCAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCTAATTATACAGATTTTAGATTCCCTCAGGTTAAAGCTCACCCGTGGCACAAGGTTTTCCATAAGCGAATGCCTCCTGAAGCAATTGACCTTATATCAAGGCTTCTCCAATATTCACCAAGTCTTCGCTACACTGCACTGCAAGCATGTGCACATCCTTTCTTTGATGAGCTCCGGGAGCCCAATGCCCGACTACCTAATGGCCGTCCACTGCCCCCACTTTTCAATTTCAGACAGGAACTGTCTGGAGCATCACCTGAATTGATAAATAGGCTCATCCCAGAGCATATTAGGCGACAGATTGGTCTCAACTTCCCCCATCCCGTTGGTACATAG 1239 0.4641 MSSMPLVPDQQPPLPAAAAALQPPPPAMVPAQAENDKEMSATVLEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYTSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVNGESNISYICSRYYRAPELIFGATEYTTSIDVWSGGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQVKAHPWHKVFHKRMPPEAIDLISRLLQYSPSLRYTALQACAHPFFDELREPNARLPNGRPLPPLFNFRQELSGASPELINRLIPEHIRRQIGLNFPHPVGT 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0821 412 Gene3D Transferase(Phosphotransferase) domain 1 152 399 - -
Mibi07g0821 412 SMART serkin_6 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0821 412 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 36 401 - -
Mibi07g0821 412 SUPERFAMILY Protein kinase-like (PK-like) 71 383 IPR011009 -
Mibi07g0821 412 Gene3D Phosphorylase Kinase; domain 1 57 151 - -
Mibi07g0821 412 CDD STKc_GSK3 67 359 IPR039192 -
Mibi07g0821 412 Pfam Protein kinase domain 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0821 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Mibi07g0821 412 MobiDBLite consensus disorder prediction 8 30 - -
Mibi07g0821 412 MobiDBLite consensus disorder prediction 1 31 - -
Mibi07g0821 412 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0821 412 ProSitePatterns Protein kinases ATP-binding region signature. 78 102 IPR017441 GO:0005524
Mibi07g0821 412 FunFam Glycogen synthase kinase-3 beta 56 151 - -
Mibi07g0821 412 FunFam Shaggy-related protein kinase kappa 152 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0821 Mibi-ChrMibi07 10252748 10257446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0821 76 394 MAP Kinase Gene Family AT3G59790 35.629 6.01e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mibi07g0821 Pkinase 2.6e-64 CL0016