Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0808 ATGGATGAGAGACAAAATGATGCAGGGCCCGCAGAACAAGGGCCATCAAACTCTTCATGGTGGCCATCAGACTTTGTTGAAAAATTTGGATCTGTTTCTCTGGGTTCTCAAGAAGAGACCTTAAATAATAAAGAATCACCTAGACAATTTGAGCAAGATGTTTTGTCACCTAATAGAGCATCACAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTCATTCCTGATAAAAGGCTCAAGGAAATTTTTGAAAATATTCCTACTATGGATGAGCTTCATGCTTTGGGTGGAGAGGGTCTAAAGGCTGATGTCATTTTGGTGGACGCAGAGAAAGACAAAAAATTATCTATGTTGAAGCAATTGATCGTTGCCCTAGTTAAAGGATTGAACTCAAATCCAGCTGCGATAATAAAAAAGATAGCTGGGCTAGTTTCTGATTTTTATAAGCGATCAAATATGGAAAGTCCAGCAAAAGCTGCACTAGAGGAAACCTCCCACATGTTTGAGAATCGTGGTGCCCAGATACTGGGACAAACAAAGAATGGTTCATGCCGTCATCGAGCTATCTTATTTAAAGTGTTAGCAGATACCGTAGGTCTTGAAAGTAGGCTCATGGTGGGCTTTCCAAATGATGGGGTTGTTGAATGTGTGGACCAATACAAGCATATGTCAGTGCTTGTTGTATTAAATTCTGTGGAACTACTGGTTGATCTCATGCGTTGCCCTGGTCAATTATTACCTCGATCAAACAAGGCAATTTTCATGACACATCTTTCGGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCACTAGAACCAAACAGTCCTTTATATGGGGTTTCAGAGAAAGTGGATCCTGACAGCACTGAAAAGGAGGAGAACCTGCCATTCCTGAGGAGATTTGACACTCCTTTAAATGTATCAGGCCTTTCTTTGCGAAATTTGATGTTACGGTCTAATACCAGTCTGGATAGGAAATTGAGTTTTTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCCAGTTCCAGTCCAGAGCATCCGTCATTTAAAGCACGTGGTCAGTCCATGCTTAGTGGTGATAGGAAAGCATTCAGGGACTTTGCTGATGAGGAGGCTGCATCAAGGTCAGATGGTGCATCTTCATCAGAAGCTCGTAGGATTAGTAGAAGAAGAAGCATGAGCATTACGCCTGAGATTGGTGATGATATCGTAAGGGCTGTACGTGCGATGAATGAAACACTGAAGCAGAATCGTCTTTTGAGAGAGCAAGTGGATAATAGCTCATTCGCCCATTCTGCAAATAATACAAATAGCGTTGGAGACCTTCAGAAAAATGGAGATGCTCTTGAGAGATCCACTTTGAATTCTCTTCCACCTGATCAAGTAAATTCCCAAAAAGCAATGTCGTTACCCTCTTCACCGCATGGTTACAGGGGTCAGACATCTGAGAGAAGTGGACTATCGAGATATGGAGTGAATGAATTGCAGTCAACGTGGAATAAAGTCCTTGAATCTTCAATGTTAAATAACAAAACCCTCTTACCATATGAAGAGTGGAATATTGACTTCTCAGAAATAACTGTTGGAACGCGCGTTGGGATTGGGTTTTTCGGAGAAGTCTTCCGTGGTGTATGGAATGGCACAGACGTTGCAATCAAGGTTTTTCTGGAGCAAGACTTAACTGCTGAAAACATGGAGGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTCCGACATCCAAATGTAATTTTATTTCTTGGGGCGTGCACAAAGCCTCCACGCTTGTCAATGGTTACTGAGTACATGGAAATGGGATCACTGTATTACTTGATCCATTTGAGTGGCCAAAAGAAGAAACTTAACTGGCGGAGAAGACTGAAGATGTTGCGAGATATATGCAGGGGGCTGATGTGCATACACAGAATGAAGATAGTTCACCGAGACCTGAAAAGTGCAAATTGTCTTGTGAATAAACATTGGACTGTGAAGATATGTGATTTTGGGCTTTCAAGGATCATGACAGAGTCTACCATCAAAGACGCTTCATCGGCCGGAACTCCGGAATGGATGGCTCCTGAACTTATTCGGAACGAACCATTCAATGAAAAATGCGATATATTTAGCCTGGGGGTGTTGATGTGGGAGCTTTGTACTTTGAGCAGACCTTGGGAGGGTATTCCACCAGAAAGGGTGGTTTATGCTGTTGCTAACGAGGGGTCTAGACTGGAGATTCCTGAAGGCCCGATAGGCAAGCTTATTGCAGATTGTTGGGCAGAACCAAATGATCGGCCAAGTTGTGAGGAGATCCTGTCTCGCTTGCATGATTGCGAGTACTCTCTGCTGGGCCAAATCTGA 2442 0.43 MDERQNDAGPAEQGPSNSSWWPSDFVEKFGSVSLGSQEETLNNKESPRQFEQDVLSPNRASQILWRTGMLSEPIPNGFYSVIPDKRLKEIFENIPTMDELHALGGEGLKADVILVDAEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRSNMESPAKAALEETSHMFENRGAQILGQTKNGSCRHRAILFKVLADTVGLESRLMVGFPNDGVVECVDQYKHMSVLVVLNSVELLVDLMRCPGQLLPRSNKAIFMTHLSAAGESDSAENDSCDSPLEPNSPLYGVSEKVDPDSTEKEENLPFLRRFDTPLNVSGLSLRNLMLRSNTSLDRKLSFSHSEPNIAIAFGRRSRRKVIAEQRTASSSPEHPSFKARGQSMLSGDRKAFRDFADEEAASRSDGASSSEARRISRRRSMSITPEIGDDIVRAVRAMNETLKQNRLLREQVDNSSFAHSANNTNSVGDLQKNGDALERSTLNSLPPDQVNSQKAMSLPSSPHGYRGQTSERSGLSRYGVNELQSTWNKVLESSMLNNKTLLPYEEWNIDFSEITVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLNWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESTIKDASSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLSRPWEGIPPERVVYAVANEGSRLEIPEGPIGKLIADCWAEPNDRPSCEEILSRLHDCEYSLLGQI 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0808 813 SMART serkin_6 554 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0808 813 CDD STKc_MAP3K-like 560 802 - -
Mibi07g0808 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Mibi07g0808 813 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Mibi07g0808 813 MobiDBLite consensus disorder prediction 479 512 - -
Mibi07g0808 813 SUPERFAMILY Protein kinase-like (PK-like) 528 802 IPR011009 -
Mibi07g0808 813 Gene3D Transferase(Phosphotransferase) domain 1 633 810 - -
Mibi07g0808 813 ProSiteProfiles Protein kinase domain profile. 554 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0808 813 ProSitePatterns Protein kinases ATP-binding region signature. 560 581 IPR017441 GO:0005524
Mibi07g0808 813 MobiDBLite consensus disorder prediction 1 24 - -
Mibi07g0808 813 MobiDBLite consensus disorder prediction 272 304 - -
Mibi07g0808 813 Gene3D Phosphorylase Kinase; domain 1 547 632 - -
Mibi07g0808 813 MobiDBLite consensus disorder prediction 363 384 - -
Mibi07g0808 813 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 345 805 - -
Mibi07g0808 813 Pfam Protein tyrosine and serine/threonine kinase 555 802 IPR001245 GO:0004672|GO:0006468
Mibi07g0808 813 MobiDBLite consensus disorder prediction 10 24 - -
Mibi07g0808 813 MobiDBLite consensus disorder prediction 397 421 - -
Mibi07g0808 813 FunFam Serine/threonine-protein kinase isoform 1 544 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0808 Mibi-ChrMibi07 10046682 10060524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0808 1 809 MAP Kinase Kinase Kinase AT3G58640 70.767 0.0 1170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Mibi07g0808 PK_Tyr_Ser-Thr 5.1e-62 CL0016