Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0798 ATGTCGCAGACTGGGAAGTCGACTCAAACAATGGGGTTCCATTCTCTCACTTCTCGATTCCACAATTTACTTGTTCCAAACGAAAACAAGCCTGATTTCAAAGAACTCGATCTGGGTTCCCCTGTTTCTCCACTAAAAACCCCTCCCACAACCTCCACCTCAACCTCCTCTTCCGGCGACAGAAAAACCATCACGAAACCCAGTAACAACAACAACAACAACTTCGAGAGCCTTCAATCGAAGCGGGGTCATCGGAGATCGGTTTCAACTGGGTCCCCATTGATATTCTCAGGTAGAACAACTTCAAACAATGGAGCAACCTCAGGGACTAATAAACTCCCTACCGGGAATATTTGTCCAAATGGGAAGATCTCAAAAACTGGTTTGGCTCCAAGAACGCCTAATAATAGAACTGATGTTTTGGGTTCAGGGAAAGTGAACTACGGCCGAGGGAACATAATGAGCGGTAAATTGAATTCTCAGCTTGGTGGGGTTTCGGGCATTGTGAAGAGGGCAATGAGTGGTTGTGATCCTGAGGAGGTGAAAAAATCTGGGAATGAGTTGTATAGAAGAGGTTACTTTTTGGAGGCATTGTCTTTGTATGATCGTGCCATTTCTATGTCGCCGAATAATCCGGCTTACCGGAGTAATAGAGCGGCGGCGTTGACGGCGGTGGGGAAGTTGGCCGCCGCGGCGAAGGAGTGCCAAGAGGCTGTCAAATTGGACCCTTGTTATGCCAGGGCTCATCAGAGACTGGCTTCACTTTATCTCCGCTTTGGGCAGGTTGAGAATGCGCAGAGGCATCTCTGTGTTCCTGGAAAACAGGTGGATCAATCTGAACTGAACAAGTTGGGGCTATTGGAGAAGCATTTGAAACGATGTGCAGAAGCACGAAAAATTGGTGATTGGAAGAGCACACTTAGGGAATCAGATACAGCCATTGCTGTTGGAGCAGATTTCTCACCCCAGCTTGTTGCTTGTAAAGCTGAAGCCTATTTGAAACTTCATCTACTCGAGAATGCTGAGTCTACCCTCTCAAACATTCCAAAGATGGAGGATTGCTCTCAAACCAAGTTCTTTGGTATGGTTGGTGAAGCTTATGTCCTCTTAGTTCGAGCTCAGGTCGAGATGGCTTTAGGAAGGTTTGAGAATGCTGTAGCAGAAGCAGAAAAGGCTAGTTTAATAGATTATAGTAACATTGAAGTTGTGAAGGTATTAAATACTGTGAAAATGGTGGCGAGGGCTCGCTCCCGAGGCAACGATCTTTTTGGCCAAGGAAAATTTTCTGAAGCTTGCTCTGCTTATGGAGAAGGCCTCAAATATGATAGTAACAACTATGTTTTGTTCTGCAATAGAGCTGTTTGCTGGTCAAAACTTGGACTGTGGGAAAAGTCTGTTGAGGATTGTAACCATGCTCTGCAAATACAACCAAACTGTACAAAGGCCCTTTTCCGCAGGGCTGTCTCAAACTCAAAGCTTGAAAGGTGGGGAGATGCTATAAGAGATTATGAGACATTAAAGCGTGAACTTCCAGGAGACAGTAAAGTTGCTGAGTCTCTCCATCAGGCTCAGCTTGCATTAAGGAAATCTCGTGGGGAAGATTGTGGTTCAAAACTTGTTCTTGAGCTTAAAGAAGTTTCCACATTAGATAGATCCAAAGCTGCAATTGCTTCTTCTGGTGTCTCAGTGGTTCATTTCAAGAAGGCATCCAATGAACAATGCCAAGAGATATCCCATTTCATAAATAATACACTCTGCATTCGATACCCATATGTTAAATTCATCAAGGTGGATGTGGAAGAGTGTACAAATATAGCAAAGGTTGAGAGCATAAAAACACTGCCAACCTTCAGAATATATGCTAATGGAGAGAGGGTGATGGAAATGATCAGGCCAAGCCACCAGTTGTTGGAGGATTCTGTGAGGAACTGTTGTAATCTCTAG 1944 0.446 MSQTGKSTQTMGFHSLTSRFHNLLVPNENKPDFKELDLGSPVSPLKTPPTTSTSTSSSGDRKTITKPSNNNNNNFESLQSKRGHRRSVSTGSPLIFSGRTTSNNGATSGTNKLPTGNICPNGKISKTGLAPRTPNNRTDVLGSGKVNYGRGNIMSGKLNSQLGGVSGIVKRAMSGCDPEEVKKSGNELYRRGYFLEALSLYDRAISMSPNNPAYRSNRAAALTAVGKLAAAAKECQEAVKLDPCYARAHQRLASLYLRFGQVENAQRHLCVPGKQVDQSELNKLGLLEKHLKRCAEARKIGDWKSTLRESDTAIAVGADFSPQLVACKAEAYLKLHLLENAESTLSNIPKMEDCSQTKFFGMVGEAYVLLVRAQVEMALGRFENAVAEAEKASLIDYSNIEVVKVLNTVKMVARARSRGNDLFGQGKFSEACSAYGEGLKYDSNNYVLFCNRAVCWSKLGLWEKSVEDCNHALQIQPNCTKALFRRAVSNSKLERWGDAIRDYETLKRELPGDSKVAESLHQAQLALRKSRGEDCGSKLVLELKEVSTLDRSKAAIASSGVSVVHFKKASNEQCQEISHFINNTLCIRYPYVKFIKVDVEECTNIAKVESIKTLPTFRIYANGERVMEMIRPSHQLLEDSVRNCCNL 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0798 647 Coils Coil 372 392 - -
Mibi07g0798 647 SUPERFAMILY Thioredoxin-like 542 633 IPR036249 -
Mibi07g0798 647 CDD TRX_family 553 638 - -
Mibi07g0798 647 MobiDBLite consensus disorder prediction 31 143 - -
Mibi07g0798 647 Pfam Tetratricopeptide repeat 185 243 - -
Mibi07g0798 647 ProSiteProfiles TPR repeat profile. 178 211 IPR019734 GO:0005515
Mibi07g0798 647 Pfam Thioredoxin 556 630 IPR013766 -
Mibi07g0798 647 SUPERFAMILY TPR-like 417 529 IPR011990 GO:0005515
Mibi07g0798 647 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 28 642 IPR044534 -
Mibi07g0798 647 Gene3D Glutaredoxin 536 644 - -
Mibi07g0798 647 MobiDBLite consensus disorder prediction 44 142 - -
Mibi07g0798 647 Gene3D Tetratricopeptide repeat domain 176 532 IPR011990 GO:0005515
Mibi07g0798 647 SMART tpr_5 366 399 IPR019734 GO:0005515
Mibi07g0798 647 SMART tpr_5 212 245 IPR019734 GO:0005515
Mibi07g0798 647 SMART tpr_5 412 445 IPR019734 GO:0005515
Mibi07g0798 647 SMART tpr_5 446 479 IPR019734 GO:0005515
Mibi07g0798 647 SMART tpr_5 178 211 IPR019734 GO:0005515
Mibi07g0798 647 SMART tpr_5 480 513 IPR019734 GO:0005515
Mibi07g0798 647 SUPERFAMILY TPR-like 178 401 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0798 Mibi-ChrMibi07 9865230 9868157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0798 411 484 U-box Gene Family AT3G07370 35.135 3.89e-07 50.4