Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0797 ATGGAAGCATTTGATTGGAGTTATGATGTTCGAGGAAATGCCTCAGAGAGAAGTCCTGATGATAATTCTGCTGTAATAGAAAGAAGAGGGTTTGATTCATCTTCTTCTCTTGTGTTGGATAGAGAGAAAGAGAAGAAGAAAGGTGTGTCGTCCACTGAGAGAAGTGTTGAAAGCTTGAAGAACCATAGCGAGGCAGAGAAGAGGAGAAGAGCTAGGATTAATGGACATCTTGATACACTTAGGAGTGTAGTTCCTGGTGCTAAGAAGATGGACAAAGCGTCGTTGCTCGGTGAGGTTATCAGAAATTTGAAAGAGCTGAAAAGGAATGCAACAAAAGCATGTGAGGGTTTGATGATACCAAAGGACAGTGATGAAATAAGAGTTGAAGAGCAGGAAGATGGTTCAAATGGCTTCCCTTATTCGATCAAAGCATCACTATGTTGTGAATATAAACCTGGTTTGTTGCCTGAATTAAGACAAGCACTTGATGCCCTTCATCTTAAGATAATGATGGCAGAAATTGCAACCTTGGGAGGAAGAATGAAGAATGTCTTTGTTATAATTAGCTGTAAAGAGCACAATATGAATGAGGATGCTGCATATCGTCAGTTTCTTGCAGTCTCTGTTCATCAAGCTATTAGGTCTGTACTTGATAGATTCTCTTGTTCAGAAGATCTCTTAGGAACCAGAAAGAGACGGAGACTTTCTATATTTAGTTCATCACCTTTAGGAGATTTCTTGTAA 744 0.3952 MEAFDWSYDVRGNASERSPDDNSAVIERRGFDSSSSLVLDREKEKKKGVSSTERSVESLKNHSEAEKRRRARINGHLDTLRSVVPGAKKMDKASLLGEVIRNLKELKRNATKACEGLMIPKDSDEIRVEEQEDGSNGFPYSIKASLCCEYKPGLLPELRQALDALHLKIMMAEIATLGGRMKNVFVIISCKEHNMNEDAAYRQFLAVSVHQAIRSVLDRFSCSEDLLGTRKRRRLSIFSSSPLGDFL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0797 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 61 109 IPR036638 GO:0046983
Mibi07g0797 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 57 106 IPR011598 GO:0046983
Mibi07g0797 247 PANTHER TRANSCRIPTION FACTOR BHLH30 31 237 IPR045847 GO:0003700|GO:0006355
Mibi07g0797 247 SMART finulus 63 112 IPR011598 GO:0046983
Mibi07g0797 247 MobiDBLite consensus disorder prediction 34 68 - -
Mibi07g0797 247 MobiDBLite consensus disorder prediction 1 68 - -
Mibi07g0797 247 Gene3D - 51 114 IPR036638 GO:0046983
Mibi07g0797 247 Pfam Helix-loop-helix DNA-binding domain 61 106 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0797 Mibi-ChrMibi07 9843960 9846059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0797 54 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.711 4.20e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi07g0797 HLH 3.9e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0797 07 9843960 9846059 Mibi07g0797 07 9843960 9846059 ECH