Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0780 ATGGCTTGGTGTTTTTTGTTCACATCTTTTGAAGGAGAGGGGAAAAAAAGTGTTATAATGGCACAATTACCTCCCAAGATCCCAAACACCAATCTATGTTGGCCTGAACTTTCTTCTTCTTCCCCACCAAAGATTCCTTCTGTGTCAAGTTTCTCACCGGATATTTCCACCGTTGCCGCCACTCAGGACCCTTTCTGGACGGATGAATTCCACGATTTCTCGTCGGAGAGACGCCAAGCCCACCGCCGGTCGGTGAGCGATTCCATTAACTTCCTCGAGGGTCACATGTTGCATGTCAATTCAAGGAATGTTCCACCTAGGTTTGAGGCTGAAAATGAGTTTGATAAATTTGATGATGAGAAATTCTTAACCATGTTTGATAATGACAAATCTGGAGTTGCCATGCCTTTAACATTTTCCTCTTCATCAAAATCTTCTAGCCCGTCATCTGACCATAACAATAAGAGCAATGCCATTAATGATGAGAAAGAAATCACTAACAACCAAGCCCAACAACACAAGAACCTGCACAATCAGAATGAAGATCAACAACATCTAAAAAATGATTCAGATGAGGTTGAAAATCAGATAAACAAACAGCAGGAAATACATCATCCCTCAGATAATACATTACCAACTTCTTCCTCTGATATGATCAGTGATCCTAAGAGGGTCAAAAGAATCTTGGCAAATAGGAAATCCGCACAGAGATCACGAGTGAGAAAGCTGCAATATATAAACGAGCTAGAACGTAGTTTGACTTTTTTCTCATTCTGTCAAAACTGGAAGGCTGAAGTTTCAGCACTGTCTCCAAGGGTTGCATTTTTAGATCAGCAACGCTTGCTTCTAAGTGTCAACAATGGTGATCTTAAGCAACGAATCGCTGCCCTCGCCCAAGACAAGATCTTCAAAGATGCTCTTCAAGATGGACTCAGGAGAGAGATAGAGAGGCTAAGGCAAGTGTGTCAACAACAAAAGCGCAAGAATAAGGAAAGTGTTGCATGA 1005 0.4169 MAWCFLFTSFEGEGKKSVIMAQLPPKIPNTNLCWPELSSSSPPKIPSVSSFSPDISTVAATQDPFWTDEFHDFSSERRQAHRRSVSDSINFLEGHMLHVNSRNVPPRFEAENEFDKFDDEKFLTMFDNDKSGVAMPLTFSSSSKSSSPSSDHNNKSNAINDEKEITNNQAQQHKNLHNQNEDQQHLKNDSDEVENQINKQQEIHHPSDNTLPTSSSDMISDPKRVKRILANRKSAQRSRVRKLQYINELERSLTFFSFCQNWKAEVSALSPRVAFLDQQRLLLSVNNGDLKQRIAALAQDKIFKDALQDGLRREIERLRQVCQQQKRKNKESVA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0780 334 Coils Coil 308 328 - -
Mibi07g0780 334 MobiDBLite consensus disorder prediction 201 222 - -
Mibi07g0780 334 MobiDBLite consensus disorder prediction 137 158 - -
Mibi07g0780 334 CDD bZIP_plant_RF2 224 280 IPR044759 GO:0003700|GO:0006355
Mibi07g0780 334 MobiDBLite consensus disorder prediction 202 219 - -
Mibi07g0780 334 Gene3D - 222 300 - -
Mibi07g0780 334 SMART brlzneu 219 289 IPR004827 GO:0003700|GO:0006355
Mibi07g0780 334 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 226 241 IPR004827 GO:0003700|GO:0006355
Mibi07g0780 334 SUPERFAMILY Leucine zipper domain 223 257 IPR046347 GO:0003700|GO:0006355
Mibi07g0780 334 Pfam bZIP transcription factor 223 252 IPR004827 GO:0003700|GO:0006355
Mibi07g0780 334 Coils Coil 176 203 - -
Mibi07g0780 334 PANTHER BASIC LEUCINE ZIPPER 34 20 329 - -
Mibi07g0780 334 FunFam Transcription factor VIP1 222 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0780 Mibi-ChrMibi07 9690123 9692077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0780 20 306 bZIP Transcription Factor Family AT3G58120 47.697 5.00e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi07g0780 bZIP_1 8.8e-07 CL0018