Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0777 ATGAGCACTGCAAGGTTCATAAAGTGTGTTACAGTTGGTGATGGAGCTGTAGGAAAGACCTGTATGCTTATATCTTACACCAGCAATACCTTCCCCACGGATTATGTGCCTACTGTTTTTGACAACTTCAGTGCAAATGTGGTGGTTGATGGCAGTACTGTTAACCTAGGATTATGGGACACTGCTGGACAGGAGGATTATAACAGGCTAAGGCCTTTGAGCTACAGAGGAGCAGATGTGTTTTTGCTTGCCTTTTCCCTCATCAGCAAAGCCAGCTATGAAAATATTGCTAAAAAGTGGATTGCTGAGCTAAGACATTATGCTCCAACTGTGCCTATTGTGCTTGTGGGAACCAAACTTGATTTGCGAGATGACAGGCAATATTTGATTGATCATCCTGGCGCTACTCCGATAACTACTGCCCAGGGACAAGAACTGAAGAAGGCAATAGGTGCTGCTGTTTACATAGAATGCAGCTCAAAGACTCAGCAGAATGTGAAGGCTGTATTTGATGCTGCAATCAAGGTTGTTTTGCAGCCACCTAAGCCAAAGAAAAAGCGAAAGAAGAACAGAACATAAGCAAGAAAGTCATCTTCCCCTGGTGGCCAAAAACAGAAAACTTGGCCATTTTCTCTCTTTGTGTGGAGAGAAATGGCGGGACCTTTTATTCGTTCTCTCTGGTCTTTTACCACTAAATCTCTTTCCCCTTCCCCATCCCACTTCACCCCATTTCATCTTTTGCCCCGAAATATCTCCGGCCACCGGTTCTTCTCCGCCGCCACAGCCTCCGCCGCCTCCGCCGCCGAACCCGGCGGCGCCCTCAACCCCAGCCGCCTCCGTAACGTGGCCGTGATTGCCCATGTTGACCATGGAAAGACCACTCTCATGGATCGACTTCTTCGTCAGTGTGGCGCCGACATACCCCATGAGCGTGCTATGGATTCCATCAGTCTTGAGCGCGAGCGTGGTATCACGATCGCTTCCAAGGTTACCTCGGTTACATGGAAGGAAAATGAGCTAAATATGGTTGATACGCCTGGACATGCAGATTTTGGTGGTGAAGTTGAACGGGTTGTCGGCATGGTCGAGGGAGCAGTATTGGTTGTAGATGCTGGTGAAGGCCCACTTGCACAAACAAAATTTGTTCTGGCAAAAGCCTTAAAGTATGGGTTACGGCCTCTTCTTCTATTGAACAAAGTGGACCGACCTTCAGTCTCTGAGGAGAGATGTAATGAAGTCGAAAGTCTGGTGTTTGATCTTTTTGCCAACCTTGGTGCAACAGAGGAGCAATTAGACTTTCCAGTTCTTTATGCTTCTGCTAAAGAAGGATGGGCATCCACCACCTTTACCAAGGATCCTCCTGCTGAGGCAAAAAATATGTCACAACTTCTTGATGCCATTGTAACTCATGTCCCATCACCAAAAGCAAACATTGATGGGCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGATTTCTATCTTGGGCGAATTTTGACTGGACGTATTCATTCTGGGATTGTTCGTGTAGGTGACAAGGTTCATGGTCTATCTAACAAAGAATCTGGAGTAGTGAAGATTGAAGATGGAAAGGTTGTGAAATTAATGAAAAAGAAGGGCACGAGCATGGTTCCAATTGATTGTGCTGGAGCTGGTGATATTATTTCAATGGCTGGGTTGGCAAATCCAATAATAGGCAACACTGTAGCCACTGCGGAGACTATGTCTGCATTACCCACAATTGAGCTGGATCCTCCAACAATTTCTATGACGTTTGGTGTAAATGACTCTCCTTTAGCTGGTCGTGATGGTACTCATTTGACTGGAGGAAAAATTGGTGATCGGCTGATGGCTGAAGCTGAAACAAACATTGCCATAAATGTGCTTCCGGGCTTATCAGAGTCATATGAAGTTCAGGGAAGAGGAGAGCTACAATTAGGTATCCTTATTGAGAATATGAGGCGTGAAGGATTTGAGTTATCTGTCTCTCCACCTAAAGTCATGTATAAAATTGAAACTGGTGAGAAACTTGAGCCGATTGAAGAAGTTACAATTGAGGTGAATGATGAACACGTTGGGTTGGTTATGGAGGCCTTATCCCACAGGCGAGCTGAAGTTATGGACATGGGTCCTGTCTCAGGAGCTGTTGGTCGGACGAGATTGTCTTTAACTTGCCCATCAAGGGGCCTGGTTGGTTATAGGAGTGTGTTCAGCAGTGACACGCGTGGAACTGGCTTCATGCACCGTGCTTTCCTTAAGTATGAAAAATTTCGAGGTCCTCTTGGCAATGTCAGGAAAGGAGTGTTGGTATCAATGGGTTATGGTTCAATTAGAGCTTATGCATTGATGAGTTTAGAAGCTCGGGGGACTTTATTTGTAACCCCAGGAATGGAGACATACGATGGGATGATTATTGGTGAACACTCACGAGATACTGATCTTGATGTCAATCCAGTGAGAGCTAAGGAACTTACAAATATTCGTGCTGCCGGCTGTGATGAAACTATCAAGCTGTCTCCGCCACGCCTTATGACCCTTGAAGAAGCTATAGGATATGTAGCTTCTGATGAGCTTATCGAGGTTACTCCAAAGGCTATACGCTTGAGGAAGAAATATCTTGATGTTAACAAGCGTAAAAGCATGAGCAAAAAGCCAAAGGAATGA 2664 0.455 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIAKKWIAELRHYAPTVPIVLVGTKLDLRDDRQYLIDHPGATPITTAQGQELKKAIGAAVYIECSSKTQQNVKAVFDAAIKVVLQPPKPKKKRKKNRTXARKSSSPGGQKQKTWPFSLFVWREMAGPFIRSLWSFTTKSLSPSPSHFTPFHLLPRNISGHRFFSAATASAASAAEPGGALNPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSVTWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPSVSEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPAEAKNMSQLLDAIVTHVPSPKANIDGPFQMLVSMMERDFYLGRILTGRIHSGIVRVGDKVHGLSNKESGVVKIEDGKVVKLMKKKGTSMVPIDCAGAGDIISMAGLANPIIGNTVATAETMSALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGDRLMAEAETNIAINVLPGLSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKIETGEKLEPIEEVTIEVNDEHVGLVMEALSHRRAEVMDMGPVSGAVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYEKFRGPLGNVRKGVLVSMGYGSIRAYALMSLEARGTLFVTPGMETYDGMIIGEHSRDTDLDVNPVRAKELTNIRAAGCDETIKLSPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDVNKRKSMSKKPKE 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0777 887 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 314 329 IPR031157 -
Mibi07g0777 887 CDD Rop_like 6 178 - -
Mibi07g0777 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 275 484 IPR027417 -
Mibi07g0777 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 178 IPR027417 -
Mibi07g0777 887 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 279 879 IPR006298 GO:0003924|GO:0005525
Mibi07g0777 887 Pfam Elongation factor G C-terminus 676 759 IPR000640 -
Mibi07g0777 887 Gene3D Translation factors 476 580 - -
Mibi07g0777 887 SMART rab_sub_5 7 180 - -
Mibi07g0777 887 SUPERFAMILY EF-G C-terminal domain-like 584 667 IPR035647 -
Mibi07g0777 887 PRINTS Transforming protein P21 ras signature 47 69 - -
Mibi07g0777 887 PRINTS Transforming protein P21 ras signature 109 122 - -
Mibi07g0777 887 PRINTS Transforming protein P21 ras signature 155 177 - -
Mibi07g0777 887 PRINTS Transforming protein P21 ras signature 7 28 - -
Mibi07g0777 887 PRINTS Transforming protein P21 ras signature 30 46 - -
Mibi07g0777 887 SMART rho_sub_3 9 180 IPR001806 GO:0003924|GO:0005525
Mibi07g0777 887 Pfam Elongation factor Tu GTP binding domain 278 473 IPR000795 GO:0003924|GO:0005525
Mibi07g0777 887 CDD TypA_BipA 279 474 - -
Mibi07g0777 887 CDD BipA_III 586 663 - -
Mibi07g0777 887 Pfam Ras family 8 178 IPR001806 GO:0003924|GO:0005525
Mibi07g0777 887 Gene3D - 5 191 IPR027417 -
Mibi07g0777 887 SMART ran_sub_2 12 207 - -
Mibi07g0777 887 FunFam GTP-binding protein TypA 278 475 - -
Mibi07g0777 887 Gene3D Elongation Factor G (Translational Gtpase), domain 3 587 871 - -
Mibi07g0777 887 ProSiteProfiles small GTPase Ras family profile. 2 296 IPR001806 GO:0003924|GO:0005525
Mibi07g0777 887 Pfam Elongation factor Tu domain 2 496 569 IPR004161 GO:0005525
Mibi07g0777 887 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 275 449 - -
Mibi07g0777 887 SMART ras_sub_4 4 180 - -
Mibi07g0777 887 FunFam GTP-binding protein TypA 764 850 - -
Mibi07g0777 887 MobiDBLite consensus disorder prediction 181 205 - -
Mibi07g0777 887 Gene3D - 669 763 - -
Mibi07g0777 887 ProSiteProfiles small GTPase Rho family profile. 1 177 - -
Mibi07g0777 887 CDD BipA_TypA_II 482 579 - -
Mibi07g0777 887 FunFam rac-like GTP-binding protein RAC2 5 193 - -
Mibi07g0777 887 CDD BipA_TypA_C 678 758 IPR035651 -
Mibi07g0777 887 SUPERFAMILY EF-G C-terminal domain-like 678 794 IPR035647 -
Mibi07g0777 887 TIGRFAM small_GTP: small GTP-binding protein domain 280 419 IPR005225 GO:0005525
Mibi07g0777 887 TIGRFAM small_GTP: small GTP-binding protein domain 7 171 IPR005225 GO:0005525
Mibi07g0777 887 FunFam GTP-binding protein TypA 587 696 - -
Mibi07g0777 887 SUPERFAMILY Translation proteins 424 580 IPR009000 -
Mibi07g0777 887 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 277 475 IPR000795 GO:0003924|GO:0005525
Mibi07g0777 887 FunFam Elongation factor family protein 476 580 - -
Mibi07g0777 887 Gene3D bipa protein 764 879 IPR042116 -
Mibi07g0777 887 Gene3D - 277 475 IPR027417 -
Mibi07g0777 887 ProSiteProfiles small GTPase Rab1 family profile. 2 211 - -
Mibi07g0777 887 FunFam GTP-binding protein TypA 669 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0777 Mibi-ChrMibi07 9651463 9664230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0777 278 402 Eukaryotic Initiation Factors Gene Family AT3G22980 42.748 5.53e-25 110