Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0755 ATGGACGACGGAGAAATCTCAAATATGGATGGCTTTCCTCAGAACCACCCACCAACCGCCGCATCATCTAATAATAACGCCAATCCTCCGATTCTGAAGAGAAAGAGAAATCTCCCAGGAAACCCAGATCCTGAAGCGGAAGTGATAGCACTATCGCCGAAGACACTAATGGCGACGAACAGATTTCTGTGTGAGATTTGTGGGAAAGGGTTTCAGAGGGATCAAAATCTGCAACTTCATAGAAGGGGACATAATCTTCCATGGAAGCTGAAGCAGAGGACAAGTAAGGAAGTGAAGAAGCGAGTTTATGTGTGCCCAGAAAAAAGCTGCGTTCACAACCATCCATCAAGGGCACTGGGGGATTTGACTGGCATCAAAAAGCACTTCTGTAGAAAGCACGGTGAGAAGAAGTGGAAGTGCGAGAAATGCTCAAAGCGGTACGCTGTTCAGTCTGATTGGAAAGCTCACTCCAAAACATGTGGTACTAGGGAATACAAATGTGACTGTGGCACCATCTTTTCACGGAGGGATAGCTTCATAACACATAGGGCATTTTGTGATGCCCTAGCAGAAGAAACAGCAAGAGTGAACGCAGCAACATCCAACAACATGACTGGTTACAATAATAGTATAATTGGAGCTGCTTCTTCAATAGGACCAAACAACAACAACAATATTATGGCAACCCATTTTCCTTCAATCTTCAAGCCTATTTCAAACAACAATAATACCAATCAGGAAGAAAATCATAATAATCAAACACCTATTAGTGGTCTATCTCTATGGATGAGCGGCCATCATCACCAACCTGAACATCATCAAACAATAATGCCTACTAATGGCAATATCACTAACCCTCATCATCATCATGATCAGAATATTCATCATGATCATCATCAGCTAAATTGGGTGTTTGGGAACAAGTTTATTCCAAGTTGTTCTTCTACTTCCTCTTGTCAAGAGCTTGCAGCAAGTACACCAATTGGAATGATTAGTGTCCCTTCCTTGTATAGCTCCCAACATCATCATCACACATATTATCAACAAACATCCTCAGCAAACATGTCAGCCACGGCGCTTTTGCAAAAAGCTGCTCAAATTGGGGCAACCTCCACCACATGTGACCCCACATTTCTGGGGAGTTTAGGATTGAAATGTAGTAGCAATCAAGTTGGTGGTCAAGAAGATGATCATCATGGGAGTAATGATAACAAGTATTATGAGATGTACGGTCCCGGTTCGGGTTCGTGTTCTGTTCTCACCAATGTTGGTGGCGGTGGAGGAAGTGATCAGACGACGGAGAACAACAACTCCCCAAGTGAAATGACACAAATGCACCCGGCAAAACGCCCTAGGCAGGTATTAGTACAAAATGAAGGAGGAGGGCAAACTAGGGATTTCCTTGGTGTTGGTGGTGTGCAGACCATTTGCCACCCTTCATCAATCAATGGATGGGTCTGA 1461 0.4374 MDDGEISNMDGFPQNHPPTAASSNNNANPPILKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVKKRVYVCPEKSCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAATSNNMTGYNNSIIGAASSIGPNNNNNIMATHFPSIFKPISNNNNTNQEENHNNQTPISGLSLWMSGHHHQPEHHQTIMPTNGNITNPHHHHDQNIHHDHHQLNWVFGNKFIPSCSSTSSCQELAASTPIGMISVPSLYSSQHHHHTYYQQTSSANMSATALLQKAAQIGATSTTCDPTFLGSLGLKCSSNQVGGQEDDHHGSNDNKYYEMYGPGSGSCSVLTNVGGGGGSDQTTENNNSPSEMTQMHPAKRPRQVLVQNEGGGQTRDFLGVGGVQTICHPSSINGWV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0755 486 MobiDBLite consensus disorder prediction 1 45 - -
Mibi07g0755 486 FunFam protein indeterminate-domain 12-like 41 109 - -
Mibi07g0755 486 FunFam protein indeterminate-domain 5, chloroplastic-like 116 195 - -
Mibi07g0755 486 SUPERFAMILY beta-beta-alpha zinc fingers 61 158 IPR036236 -
Mibi07g0755 486 MobiDBLite consensus disorder prediction 12 31 - -
Mibi07g0755 486 SMART c2h2final6 103 133 IPR013087 -
Mibi07g0755 486 SMART c2h2final6 62 84 IPR013087 -
Mibi07g0755 486 SMART c2h2final6 138 158 IPR013087 -
Mibi07g0755 486 MobiDBLite consensus disorder prediction 423 449 - -
Mibi07g0755 486 MobiDBLite consensus disorder prediction 423 444 - -
Mibi07g0755 486 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Mibi07g0755 486 Gene3D Classic Zinc Finger 58 85 - -
Mibi07g0755 486 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 84 IPR013087 -
Mibi07g0755 486 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 21 474 IPR031140 -
Mibi07g0755 486 Gene3D Classic Zinc Finger 95 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0755 Mibi-ChrMibi07 9283919 9286324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0755 2 486 IDZ Gene Family AT1G03840 50.929 1.17e-146 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi07g0755 None None None