Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0741 ATGGCTTCGTTGTTCAAGGATTTGACCAAGCTTTCAGCCTACCGAGATAGAAGATTTCCGGGAACACAAGAGGAATTTGAGCACGCACTCCTGAGTTCGACCACTGTTTATGTGGGAAATATGTCTTTTTACACAACAGAAGAGCAAGTTTATGAACTTTTTTCTCGAGCTGGAGAAATTAAGAAAATCATCATGGGATTGGATAAAAACTCGAAAACTCCTTGTGGCTTTTGTTTTGTTTTATACTACTCTCGAGAAGATACTGAAGATGCTGTCAAATACATAAGTGCGACAATACTTGATGATCGTCCTATTCGTGTAGATTTTGACTGGGGATTCCAGGACGGGAGACAATGGGGTCGTGGTCGTAGTGGTGGTCAGGTGCGTGATGAATATCGGACAGATTATGATCCTGATATCCTTTTAGTTGTTCAATTTTCAGTGAATTGCAATTTTTTTCCTTATAATGAAAGTGACATTGTTCAGAAAGAGTTGGAGGCACAAAGGCAGCTTGTTGATTACGGTGCTGGTTCTTTGGGCTCTTTTCCACCAGTTTTGCCACCATCCTATGGCAGACATGGTGGTTCTCATCGGTATGGTAGAGATTACCATAGGAAGAGAAACAGAGATGATGATCGCCATGCTTACGAGTCCTCAAAAAGATCATCAGATTATGACTCTCGGAGGAACTCTGATCATGACTCTAGGCCGGAAAAGAATCCACGATTTCGTGAGAGTGGTGATTCTGATGATGACGAGGAAGATGATCGAAAAAGAAGATCTTAA 786 0.416 MASLFKDLTKLSAYRDRRFPGTQEEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISATILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILLVVQFSVNCNFFPYNESDIVQKELEAQRQLVDYGAGSLGSFPPVLPPSYGRHGGSHRYGRDYHRKRNRDDDRHAYESSKRSSDYDSRRNSDHDSRPEKNPRFRESGDSDDDEEDDRKRRS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0741 261 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
Mibi07g0741 261 MobiDBLite consensus disorder prediction 182 261 - -
Mibi07g0741 261 PANTHER 20 KD NUCLEAR CAP BINDING PROTEIN 2 139 IPR027157 GO:0000339|GO:0005846|GO:0045292
Mibi07g0741 261 SUPERFAMILY RNA-binding domain, RBD 27 137 IPR035979 GO:0003676
Mibi07g0741 261 CDD RRM_NCBP2 36 113 IPR034148 -
Mibi07g0741 261 FunFam Nuclear cap-binding protein subunit 2 4 141 - -
Mibi07g0741 261 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 106 IPR000504 GO:0003723
Mibi07g0741 261 SMART rrm1_1 35 108 IPR000504 GO:0003723
Mibi07g0741 261 MobiDBLite consensus disorder prediction 204 261 - -
Mibi07g0741 261 Gene3D - 6 140 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0741 Mibi-ChrMibi07 9132489 9136848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0741 33 109 Eukaryotic Initiation Factors Gene Family AT1G49760 27.273 1.50e-06 47.0