Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0730 ATGCCTGCACAGAAGCGTTCTTTGCCGGACTCTACAGACGATGGAGATGTCTCTGAACTCTATAACCACCGCCATGCGAAGCAATCTCATCGGGATAAAGAGCTACAAGCCGAGGAAAAGAGGGCAGACGAAGATGATGGGCAAGGAGAGCTTGCTGATGGCGAAGAACAACAACAACACAACGACCAAGAGCTAGATAATAAGGAGGACAAACCAGAGGATTCTGAGGAAAGCCCATCTTCTGAACCTGAAGAAAAACCTGAATTTGTGTTTGTTGAACTTCTGGAAGTTCGTAAAGATGTGCAATGTCCAATTTGCCTTGGTATTATCAAGAAAACACGGACAGTCATGGAATGCTTGCACCGTTTTTGCAGGGAATGCATTGACAAGTCAATGAGACTAGGGAATAACGAATGCCCTGCTTGCCGCACACATTGTGCCAGTCGTCGTTCTTTGAGAGATGATCCAAACTATGATGCTCTAATTGCTGCATTATATCCAGATATTGAGAAGTATGAGGAAGAGGAGCTTGAATTTCGTGAAGAGGAGAAGACCCGCAATAAGCAGATTCAGGCTTCAATTGCAAAAGTGGTTCAACGGCAATCTGAAGCACTGGTTAAGAGGCGTAATAAGGATACACCACCAGGTGCATTTGTCACAAGGTCACAGCGGAATCAAAGGAACGTTCAAGCTAGGAGACAAAACCATGGAATTGATCAAGGATCAGAAGACAACGAAGAGGAAAATGAAAATAATGGAGAAAAGGACTCATCTTCCACTGATGAGCGGAGTGCAGAACCAAAGAAAAAGCGGAAGAGAGGGACAAGAGTTCGTCCTTCCCAGCCTTCCTCATCAAGGGCAAGTCCTGATGGTGGATTTATAGAAAGTGATGCCGATATAATAAGAGAAACTCGAGGAATTTCTTCAAGGCATTTGTCAAAACCTCAGAAGCTTACTTGGGGAAGGGGTCGTTTTAGGAGTCACACTCGACATGGCAGTAACAGTGGCAGCTCCAGCAAGAGTTCTCGTGTTAGTCGTGTGTCTAAGTTTGTTGATTATTTAAAAAACTTAGATGAAAACACAGATGAGTATGATATCCATCTTATGCTTGTTTCTTTGGACAAAGAAAGTTTACCAAGTTTGCAGCAGCCGCACCTTTGCTGTCGGCCAACTCTGTCCGTCAAGCACCTTTGTGAATATATTGCTCGTGAGGCGCCATTGACAGCTGAAGAGGTCGAGATATTGGCGGTTAAAGGAAGCTGTGGTACAGTCTGTAATAAGTCAGCTGATGAGGCTTCAACCTTGCTGAATGACGAGCTTACTACACTGATTGTAGATCCCTGCAAAGATGAACTGGAAATTTTACAAGTACATGAAACTTTGGCTGGGCTCAAGTCCAAATGCATATCTAAAATGGAGCACCTGATTCTGGCATTTAGGAGGAAGGATAAAATATAG 1458 0.4396 MPAQKRSLPDSTDDGDVSELYNHRHAKQSHRDKELQAEEKRADEDDGQGELADGEEQQQHNDQELDNKEDKPEDSEESPSSEPEEKPEFVFVELLEVRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIEKYEEEELEFREEEKTRNKQIQASIAKVVQRQSEALVKRRNKDTPPGAFVTRSQRNQRNVQARRQNHGIDQGSEDNEEENENNGEKDSSSTDERSAEPKKKRKRGTRVRPSQPSSSRASPDGGFIESDADIIRETRGISSRHLSKPQKLTWGRGRFRSHTRHGSNSGSSSKSSRVSRVSKFVDYLKNLDENTDEYDIHLMLVSLDKESLPSLQQPHLCCRPTLSVKHLCEYIAREAPLTAEEVEILAVKGSCGTVCNKSADEASTLLNDELTTLIVDPCKDELEILQVHETLAGLKSKCISKMEHLILAFRRKDKI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0730 485 PANTHER OS11G0578200 PROTEIN 1 483 IPR044592 -
Mibi07g0730 485 MobiDBLite consensus disorder prediction 9 75 - -
Mibi07g0730 485 Pfam Zinc finger, C3HC4 type (RING finger) 102 142 - -
Mibi07g0730 485 SUPERFAMILY RING/U-box 90 157 - -
Mibi07g0730 485 MobiDBLite consensus disorder prediction 1 87 - -
Mibi07g0730 485 MobiDBLite consensus disorder prediction 252 268 - -
Mibi07g0730 485 SMART ring_2 103 142 IPR001841 -
Mibi07g0730 485 CDD RING-HC_RING1_like 103 143 - -
Mibi07g0730 485 MobiDBLite consensus disorder prediction 296 310 - -
Mibi07g0730 485 MobiDBLite consensus disorder prediction 216 236 - -
Mibi07g0730 485 ProSitePatterns Zinc finger RING-type signature. 119 128 IPR017907 -
Mibi07g0730 485 MobiDBLite consensus disorder prediction 201 342 - -
Mibi07g0730 485 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 166 IPR013083 -
Mibi07g0730 485 ProSiteProfiles Zinc finger RING-type profile. 103 143 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0730 Mibi-ChrMibi07 8986689 8993873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0730 96 166 C3H Transcription Factor Family AT3G23060 36.486 2.75e-07 51.2