Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0728 ATGGTATGCCTGAGATTTGAAATGGTTGCTTGTAGTAAGAGAAGGGGATTAGGGTTTTTATTGCAGGTTGCGTTTTGGTGGTGGGCTGTTTTGTTATTGTTTGTTCGTCCTGTGGTGGGTTTGAGACCGCTCAGGGAAAGAACTCGGTCATGGGGTGATGAGTGGCTAATCACAAGAAAAGTGGAAAGTGAGCTCGGTCCATTTTCACAATGGAACATAACAGGAACATACAAAGGAACGTGGAAATTTTTAGATACCACCAATGGCTCTTCCAGATTTCCTGACATCAAAAAAACAAATGGCAATACTGTAATTGAATTAATTAGTACACCCACAAAAATAAATGGTGTGCATTATGTGCAGGGAGTAGTTATATGCCATGATGTGTTTGACAATGAATACAATGTCGGTGGTGCTCAAATCAGAGTAGAAGGTGTATATATATGGCCTTTTAGACAGCTTCGAATGGTAGCCAGCAGTGGAAAAGAGGGAGAGTTAAATCAAGGTGAAGATAATATTTTATCTAATCCATATCATCTGCTTGGAGTCTTCTCATCCCAAGTATTCCAAGAATCTTCACGGGATAAAATGTGGAAAAGAAAACATTCCCCAATATATGATGTGGAGAAACGCTGCAATTTTGAAATTGCTGCACAAATTTCACGACTGTCATCATCAAAAACTGATGGGGATAAGGACCTTTTCCATATTGAAGGGCTAACAGAGAGTCCCTCAACTGATGATGATGGGGACTGCTTCTCACCTGTACTACTAAATGCAACTTCTGTTAACATTGAGGTCTACTACAACAAAGCAGTGAATTACACACTGATGGTTACCTTTGTGTCTTTCTTGCAAGTTCTCTTATTGATTCGACAAATGGAGCATAGCAACACTCAATCTGGAGCTGCTAAGGTTTCCATTTTTATGATTGGCCAGCAGGCAATCATGGATGCTTATCTTTGCCTTTTACATCTGACTGCTGGGATACTAGTTGAGTCTTTGTTCAATGCTTTTGCAACTGCTGCTTTTTTCAAGTTTGTGGTCTTCTCAATATTTGAGATGAGATATCTCCTTGCCATATGGAAGGCAAGTAGGCCTTTCAACAATGGGGAAGGTTGGGAAACAATGAGACGGGAGCTTTCAATGTTGTACAGTCGTTTCTATGGGATCCTGTTGGGAGGCATTCTACTCATGTATGAGTTTCATAGTTATTTGAGACCTATTATCCTTCTTATGTACTCTTTTTGGATACCTCAAATTATTACCAATGTTGTTCGTGATTCACGCAAACCATTGCATCCTCATTATATTCTAGGGATGACCATCACTCGTCTAGCAATCCCATTATATGTTTTTGGTTGCCCTCACAATTTCATGCGCATCGAACCTCACAAGAACTGGTGTATTTGTTTGGTTGTATTTGTTGGATTTCAAGCCGTGGTTCTTTTGCTTCAGCACTACCTTGGATCCCGTTGGTTCATTCCTCGACAGATTCTACCTGAGAAATACAGCTATTATAGGAGATTAGATCAAGACAGAAGTCATGCTTCAGACTGCGTTATTTGTATGACAGCCATTGATTTTTCTCAGAGATCCAATGAATGCATGGTAACACCTTGCGATCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGTCCCACTTGCCGGCGGCCCCTGCCCCCTGCCTAG 1713 0.4081 MVCLRFEMVACSKRRGLGFLLQVAFWWWAVLLLFVRPVVGLRPLRERTRSWGDEWLITRKVESELGPFSQWNITGTYKGTWKFLDTTNGSSRFPDIKKTNGNTVIELISTPTKINGVHYVQGVVICHDVFDNEYNVGGAQIRVEGVYIWPFRQLRMVASSGKEGELNQGEDNILSNPYHLLGVFSSQVFQESSRDKMWKRKHSPIYDVEKRCNFEIAAQISRLSSSKTDGDKDLFHIEGLTESPSTDDDGDCFSPVLLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIFMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPFNNGEGWETMRRELSMLYSRFYGILLGGILLMYEFHSYLRPIILLMYSFWIPQIITNVVRDSRKPLHPHYILGMTITRLAIPLYVFGCPHNFMRIEPHKNWCICLVVFVGFQAVVLLLQHYLGSRWFIPRQILPEKYSYYRRLDQDRSHASDCVICMTAIDFSQRSNECMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0728 570 Pfam Ring finger domain 519 564 IPR001841 -
Mibi07g0728 570 ProSiteProfiles Zinc finger RING-type profile. 520 564 IPR001841 -
Mibi07g0728 570 SMART ringv_2 519 564 IPR011016 GO:0008270
Mibi07g0728 570 PANTHER RING ZINC FINGER PROTEIN 130 569 - -
Mibi07g0728 570 SMART ring_2 520 563 IPR001841 -
Mibi07g0728 570 FunFam E3 ubiquitin-protein ligase, putative 506 570 - -
Mibi07g0728 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 506 570 IPR013083 -
Mibi07g0728 570 SUPERFAMILY RING/U-box 507 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0728 Mibi-ChrMibi07 8966245 8974509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0728 511 568 C3H Transcription Factor Family AT1G53010 36.667 6.30e-08 51.2