Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0718 ATGGGGTGCATATGTTCCAAGACATCAGCTGTGGAAGATAGCCGGGAAGATTTGACAAAGAAATCAATATCTAGCAGGAGAGGGTCTTCAAGGTTGAATTCCTCTAAAAGAAACGAAGGGGTTTGGGGAACAGATAAGTTAGAAAGAAATGATGTGAAAATTTCATTGATTGACAAGAAAACCAATGGCTCATTTCAGTTGTATGATGATCATCAAGTGGGGAATAAGGAAATAGAGAAGCCTGAATTGACTGTCCTTAACAATCCCAGTCTTGGAAAGGTTCCAAAGGCTGTAGAAGGAGAACAAGTTGCAGCAGGATGGCCTAGTTGGCTTTCTTCTGTGGCTTGTGAAGCTATCAATGGATGGATACCTCGAAGCGCCAATACTTTTGAGAGATTAAATAAAATTGGCCAAGGAACTTACAGTACTGTTTATAAAGCACGTGATGTAACTCATCAAAAGATTGTGGCTTTGAAGAGAGTTCGTTTTGATAATCTTGATCCCGAGAGTGTGAGGTTTATGGCAAGGGAAATCCTCATTCTTCGTAGACTCGACCATCCAAATATCATCAAGCTGGATGGTTTGATAACATCTCAAACCTCTCGCAGCTTGTACCTCATTTTTGAGTATATGGAGCATGATCTTACCGGACTAGCATCACGTCCTGGCATCAAGTTTTCTGAACCACAGGTTAAGTGCTACATGCAACAACTTCTTAGTGGACTGGATCATTGTCACAGTCGTGGTGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAACAACGGCATCTTAAAAATTGCAGATTTTGGGTTGGCAAGTTTCTTTGACCCCAATCATAGTGTTCCATTGACCAGTCGTGTAGTTACTCTCTGGTACAGACCACCAGAACTTTTACTTGGAGCATCTCATTATGGAGTCGCGGTAGATTTGTGGAGCACTGGTTGCATACTTGGGGAACTATATACTGGCAGGCCTATATTGCCAGGAAAAACTGAGGTTGAGCAACTGCACAGGATTTTCAAGCTTTGTGGATCACCATCTGAGGACTATTGGCTTAAACAGAAATTACCACATGCTGCAGTATTCAAGCCTCCACACCGATACAGACGAAGTATTACAGAAACGTTTAAAGAATATCCATCTGTTTCAGTGAGGCTTCTAGAGACGCTTCTTTCTGTAGATCCTGCACAACGAGGGACAGCAGCAAATGCTCTAAAAAGCGAGTTCTTCACAACAGATCCCCTTGCTTGTGATCCATCAAGTTTACCAAAGTATCCTCCCAGCAAAGAAATTGATTCTAAGTTACGGGATGAAGAAACCAGAAGGCAAGGAGCTATTGGAGGAAGGGAGCAGAAAGGTGGCTCAGGAGTAAGAAAAGAAAGGAAACATGGGATGACTATTCTATCAAAGCACAATGTTGACCCACGCATATCAACAGAGCAAGGACAACATTCCAATTCAAATAGCCGAAGTGAAGTGTTTCACCACCCCCATAGAGAACCTGTTTCTGGATTTTTGGTTTATCCCCCACAAAACCAGTCACATGTTAAAGAAATGGAAAATAATTTCAGTGGGAATCTTTATAGGAGGCCTTCACATTCAGGTCCACTGGTTCCGGGTATGCAATTAGCAAGAGGTGGAAAGGAAGTTGATGAAGGGCCTCTTGGTTCAAACAGAATCAACTTGTCAAAACTATCTGGCTTAGTTGCCTCGAGAACTTCATCATCCGAAGATCGAGAGGAAAGACGAATTTCCTTGCTTCCTAGAAAAACATTGGAAGTTAAAAAATCTGTGGAGTCAACTAATATAGTATCAGATTCCAGAAGGCATGATAGGAAACGCCACTCCCCACGAATTAAAGATCTCAGTCATATAGAAAATGCAAGAGGCTCCACTCAAGAATTAACTCCGGGTGGCCGTGGTGGGTACATGGATAACAAGATCTATCTCTCTGGTCCATTGCTTGCTACTACAAACAACATGGATCAGATGCTTAAAGAGCATGAGCGAAAGATCCAAGAATTTTCTAGAAGAGCACGTATTGACAAGTCAAGAGGTGGGAAAATTCGTGCACATAGAAAGTAG 2097 0.4225 MGCICSKTSAVEDSREDLTKKSISSRRGSSRLNSSKRNEGVWGTDKLERNDVKISLIDKKTNGSFQLYDDHQVGNKEIEKPELTVLNNPSLGKVPKAVEGEQVAAGWPSWLSSVACEAINGWIPRSANTFERLNKIGQGTYSTVYKARDVTHQKIVALKRVRFDNLDPESVRFMAREILILRRLDHPNIIKLDGLITSQTSRSLYLIFEYMEHDLTGLASRPGIKFSEPQVKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKQKLPHAAVFKPPHRYRRSITETFKEYPSVSVRLLETLLSVDPAQRGTAANALKSEFFTTDPLACDPSSLPKYPPSKEIDSKLRDEETRRQGAIGGREQKGGSGVRKERKHGMTILSKHNVDPRISTEQGQHSNSNSRSEVFHHPHREPVSGFLVYPPQNQSHVKEMENNFSGNLYRRPSHSGPLVPGMQLARGGKEVDEGPLGSNRINLSKLSGLVASRTSSSEDREERRISLLPRKTLEVKKSVESTNIVSDSRRHDRKRHSPRIKDLSHIENARGSTQELTPGGRGGYMDNKIYLSGPLLATTNNMDQMLKEHERKIQEFSRRARIDKSRGGKIRAHRK 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0718 698 MobiDBLite consensus disorder prediction 675 698 - -
Mibi07g0718 698 Gene3D Transferase(Phosphotransferase) domain 1 213 451 - -
Mibi07g0718 698 Pfam Protein kinase domain 130 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0718 698 SUPERFAMILY Protein kinase-like (PK-like) 123 420 IPR011009 -
Mibi07g0718 698 MobiDBLite consensus disorder prediction 476 494 - -
Mibi07g0718 698 Coils Coil 662 689 - -
Mibi07g0718 698 MobiDBLite consensus disorder prediction 457 473 - -
Mibi07g0718 698 CDD STKc_CDK9_like 130 414 - -
Mibi07g0718 698 FunFam probable serine/threonine-protein kinase At1g54610 213 454 - -
Mibi07g0718 698 Gene3D Phosphorylase Kinase; domain 1 117 212 - -
Mibi07g0718 698 MobiDBLite consensus disorder prediction 433 450 - -
Mibi07g0718 698 ProSiteProfiles Protein kinase domain profile. 130 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0718 698 MobiDBLite consensus disorder prediction 15 39 - -
Mibi07g0718 698 FunFam probable serine/threonine-protein kinase At1g54610 117 212 - -
Mibi07g0718 698 MobiDBLite consensus disorder prediction 25 39 - -
Mibi07g0718 698 SMART serkin_6 130 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0718 698 PANTHER CELL DIVISION PROTEIN KINASE 128 420 - -
Mibi07g0718 698 MobiDBLite consensus disorder prediction 420 499 - -
Mibi07g0718 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Mibi07g0718 698 MobiDBLite consensus disorder prediction 602 621 - -
Mibi07g0718 698 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0718 Mibi-ChrMibi07 8834367 8839325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0718 122 455 Core Cell Cycle Gene Families AT5G10270 50.000 4.15e-115 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi07g0718 Pkinase 1.2e-67 CL0016