Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0706 ATGCCAATTTCGGCCGCCTCCTACTCTCTTTTATATTTCTTATTTTATTCTTCCGTTTCCTCTTATTCACTCATCTTCTTCTCTCTCTCTTTCTCCTCGTTCCCTGCCTGCGGTTTCAGTCGTCAATGCTTTTGCCTTTCTTTTGATCTCAGAGCTTGTAGTCTTCCGAAAAACTTCTTCCCAATCAATCTATTTAGACACCCAAAAGATCACATTTTGAATCCAAAAATGGCTGCCTTAGATCAGTATTTTGGGGAGGCTGCGTCCCGAATTGATTCCTTCGGTGAAGATGATCCTTATTCAGAAAAGTGGGAATCTGGTGCAGATTCCATTGCAGCTTCTGATGGAAATGACTCAAATGGCTTCGACTGCAATATCTGTTTGGACTGTGTGCAAGATCCAGTGGTCACTCTTTGTGGTCATCTCTTCTGCTGGCCCTGTATTTACAAATGGCTCCATTTCCACAATCTCTCCAACGAAGAAAATGGCCAAAATCAGAGTCCACAATGCCCCGTATGCAAAACTGAGGTTTCCCAATCCTCGCTTGTTCCACTCTATGGCCGAGGCGAAACCACAAAACCTTCCTCCAAAGGCAAGTCCCACCATGTGGGTAGTATGATCCCACAAAGACCACATGGACCTTTATCCATGGTTGATCCTCGAAGATCATTTAATGCTACTACTAATAGAGCAGTTCCACAACCCTCTTCCCAATTCTATCATGGCCACTATCCTTATTATCATCATCCTCAACGGTTCAGCTCAATCCCAAGCAGTTCTAACTCAGGAATGCTTGGCATGGATGGTGCACTAAGAAACGCATTCGATTCAAGAATTGGTGTATTTGGTGAGATGATATATGCGAGGGTGTTTGGGAACCAAGTGACAAACGTATACGCTTACCCTGATATATATAATCTAGCAGGGAACAGTAATCCAAGGATCAGAAGGCATTTGATGCAAGCTGATAGGCAACTGAACAGAATCTGCTTTTTCCTGCTCTGTTCTTTAGTTTTGTGTCTTCTCTTATTTTGA 1035 0.4309 MPISAASYSLLYFLFYSSVSSYSLIFFSLSFSSFPACGFSRQCFCLSFDLRACSLPKNFFPINLFRHPKDHILNPKMAALDQYFGEAASRIDSFGEDDPYSEKWESGADSIAASDGNDSNGFDCNICLDCVQDPVVTLCGHLFCWPCIYKWLHFHNLSNEENGQNQSPQCPVCKTEVSQSSLVPLYGRGETTKPSSKGKSHHVGSMIPQRPHGPLSMVDPRRSFNATTNRAVPQPSSQFYHGHYPYYHHPQRFSSIPSSSNSGMLGMDGALRNAFDSRIGVFGEMIYARVFGNQVTNVYAYPDIYNLAGNSNPRIRRHLMQADRQLNRICFFLLCSLVLCLLLF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0706 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 205 IPR013083 -
Mibi07g0706 344 CDD RING-HC_AtRMA_like 122 174 - -
Mibi07g0706 344 ProSitePatterns Zinc finger RING-type signature. 139 148 IPR017907 -
Mibi07g0706 344 SMART ring_2 124 173 IPR001841 -
Mibi07g0706 344 MobiDBLite consensus disorder prediction 184 217 - -
Mibi07g0706 344 Pfam Zinc finger, C3HC4 type (RING finger) 124 156 - -
Mibi07g0706 344 ProSiteProfiles Zinc finger RING-type profile. 124 174 IPR001841 -
Mibi07g0706 344 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 82 341 IPR045103 GO:0005783|GO:0006511|GO:0061630
Mibi07g0706 344 SUPERFAMILY RING/U-box 117 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0706 Mibi-ChrMibi07 8727635 8732898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0706 109 344 C3H Transcription Factor Family AT4G28270 37.917 7.74e-44 148