Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0633 ATGAGTGTCTCGGGGCAAATCCAGCAACTCTCATGGCTTGAAAGCAGCCAGCAGTGGAATTTGTTTTGGTCTCAGCCAAGGCAACAGTGTGAGGTTTATGCTTTTTGTGGAGCATTTGGTAGCTGCAATGAGAATTCCTTGCCGTTTTGTACTTGCTTGACTGGTTTTGAGCCAAAGTCACAAACTGATTGGTATCTGCAGGATCACTCAGGTGGGTGTGTGAGGAAATCAAAGTTGCAATGTGAGAATCCAAGTTCATCTAACAGAGAGAAAGATAGGTTTTTGGCAATGCCAAACATTGCCTTACCTAAACATGCACAATCTGTATCAGTAGGGAATGCTGGTGAATGTGAATCCATGTGCTTGAATAATTGCAATTGCTCTGCTTATGCTTATGACATGAATGGGTGCTTAATTTGGTATGGAGATTTAATAAGTCTGCAGCAACTTTCCGATGATGATAGTGATGGAGAAACATTATTTCTAAAAGTTGCAGCTTCTGAGTTCCCAGAAGCTAAGCAGAAAAGGCAAGAAATCATTGGTATTTTGGTAGGCTTGGTTGGAGGTATAGGGGTTCTTCTAGCAATTTCCTTCTTTGTGATGATGAGAATGAAAAAAAGTGGAGCTGGATTAGGGAGAACGATGATGAGTTCATCAATGGCGTTTACGCATTGTGGAGAAATTGTTGGTATTGTGGTGGGCATTATAGGTGGTTTAGGGGCTCTCATAGCCTTTCTACTGTTTGTGGTATTCAGAAGAAGAAGAATTATTAGAAAAGGAAAATCAGTGGATGGTTCGTTGATGGCATTTGGGTACAGAGATTTGCAAATTGCAACCAAGAATTTCTCTGACAAGCTAGAAGGAGGAGACTTTAGCCTCACAAAGCTAGTTGGAATGGAAATCAACAGAACCCTCACAACCATGAGAGGGACAAGAGGTTATCTTGCTCCAGAGTGGATTTCTGGTGTGGCTATAACATCTAAAGTTGATGTTTATAGTTATGGAATGATGTTATTCGAGTTGGTGTCCGGAAGAAGAAACTTTGAGCCCTCGAAAGATGGCCGAGTGAAGTTCTTTCCTACATGGGCTGCAAATGTAGTGATCCAAGGAGGTGATGTTCTTGAGCTTTTGGATCCTATGTTAGAGGGAAATGCAGACATTGAGGAGGTGACAAAGATGATTAAACTTGCTTCTTGGTGTGTACAAGATGAAGAGATAAACAGGCCATCCATGTGTCAAATAGTTCCAATTCTTGAGGGATTTTTGGATACGAATTTGCCTCCTATTCCAAGATCCCTCCTACTGTTTGTTGACGACTAG 1320 0.4152 MSVSGQIQQLSWLESSQQWNLFWSQPRQQCEVYAFCGAFGSCNENSLPFCTCLTGFEPKSQTDWYLQDHSGGCVRKSKLQCENPSSSNREKDRFLAMPNIALPKHAQSVSVGNAGECESMCLNNCNCSAYAYDMNGCLIWYGDLISLQQLSDDDSDGETLFLKVAASEFPEAKQKRQEIIGILVGLVGGIGVLLAISFFVMMRMKKSGAGLGRTMMSSSMAFTHCGEIVGIVVGIIGGLGALIAFLLFVVFRRRRIIRKGKSVDGSLMAFGYRDLQIATKNFSDKLEGGDFSLTKLVGMEINRTLTTMRGTRGYLAPEWISGVAITSKVDVYSYGMMLFELVSGRRNFEPSKDGRVKFFPTWAANVVIQGGDVLELLDPMLEGNADIEEVTKMIKLASWCVQDEEINRPSMCQIVPILEGFLDTNLPPIPRSLLLFVDD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0633 439 CDD PAN_AP_plant 78 165 - -
Mibi07g0633 439 ProSiteProfiles PAN/Apple domain profile. 81 165 IPR003609 -
Mibi07g0633 439 SUPERFAMILY Hairpin loop containing domain-like 92 147 - -
Mibi07g0633 439 SMART ntp_6 89 164 IPR003609 -
Mibi07g0633 439 SUPERFAMILY Protein kinase-like (PK-like) 289 432 IPR011009 -
Mibi07g0633 439 Gene3D Transferase(Phosphotransferase) domain 1 277 426 - -
Mibi07g0633 439 ProSiteProfiles Protein kinase domain profile. 103 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0633 439 PANTHER OS07G0415500 PROTEIN 290 430 - -
Mibi07g0633 439 Pfam PAN-like domain 89 146 IPR003609 -
Mibi07g0633 439 Pfam S-locus glycoprotein domain 1 60 IPR000858 GO:0048544
Mibi07g0633 439 Pfam Protein kinase domain 289 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0633 Mibi-ChrMibi07 7772852 7774567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0633 290 428 Receptor kinase-like Gene Family AT5G20050 39.041 1.45e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi07g0633 Pkinase 5.3e-14 CL0016