Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0629 ATGAAGAACTGCGAGCTTTGCAGAACTCCGGCGAGGACTTACTGTGAATCCGACATGGCTAGCTTATGCTGGGACTGTGATGCTAAGGTTCACGGCGCTAATTTCTTGGTAACTAGACATTCCAGAACTCTTCTATGTCACACGTGCCAATCTCCGACGCCGTGGAAAGCCTCCGGCGCCGCCCTCGGTAACACCGTCTCCGTCTGCCGGAGATGTGACGGCGGTGTCAACTTCAGCGACGACGACGGCGAAAGCGAAGGCGGTAACGACACCGAAATGAGCTCCGGCGACGACGACGGAAGCAGCAGCGACGGCGGCGACGGCGATGAGGTCGGTGTTGATGGAGATGAGGGGGATAATCAAATAGTGCCTTGGTCTTCTTCCTCCTCTACGCCTCCACCGCCTGCGAGTTCTTCTAGTAGTGATGAATCTAATAACAACTGTGACAGAAATAATGTAACTGAATTAGGTGCAACGGTTTCAACGTTGAAACGAAGGCGTGAAAATCATCATGCATCCAAATCCAATCATAACTTCCAGGACGGTGAGGGTCGGAGCGATGGAGGATGA 570 0.5298 MKNCELCRTPARTYCESDMASLCWDCDAKVHGANFLVTRHSRTLLCHTCQSPTPWKASGAALGNTVSVCRRCDGGVNFSDDDGESEGGNDTEMSSGDDDGSSSDGGDGDEVGVDGDEGDNQIVPWSSSSSTPPPPASSSSSDESNNNCDRNNVTELGATVSTLKRRRENHHASKSNHNFQDGEGRSDGG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0629 189 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Mibi07g0629 189 SMART bboxneu5 1 45 IPR000315 GO:0008270
Mibi07g0629 189 CDD Bbox1_BBX-like 4 45 - -
Mibi07g0629 189 MobiDBLite consensus disorder prediction 80 189 - -
Mibi07g0629 189 MobiDBLite consensus disorder prediction 102 116 - -
Mibi07g0629 189 Pfam B-box zinc finger 2 41 IPR000315 GO:0008270
Mibi07g0629 189 MobiDBLite consensus disorder prediction 173 189 - -
Mibi07g0629 189 MobiDBLite consensus disorder prediction 121 159 - -
Mibi07g0629 189 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0629 Mibi-ChrMibi07 7716337 7717228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0629 2 133 C2C2-CO-like Transcription Factor Family AT4G27310 42.593 1.17e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi07g0629 zf-B_box 3.3e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0395 01 3785613 3786406 Mibi07g0629 07 7716337 7717228 CCT
Mibi07g0629 07 7716337 7717228 Mibi07g0629 07 7716337 7717228 ECH