Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0627 ATGAAAGCCCATGTTCTGCTTTGTGCTTCTTTACTCTGTTTTCCTCTGTTCTGCTTGGCTAGCAATACCTTGAAGATGGGTCAAAACCTTACTCACAGGGGAAATGATACCAGCGGCAACCTTGTATCAACAGGAAATCAGTTTGAACTGGGTTTCTTTTCCCCTATTGGAACCTCTAACAGATACCTAGGAATATGGTACCATGAGAAAGAACCTCAAACACTTGTCTGGGTTGCTAACAGAGACGACCCCATTCCTCATTCAAAAGCTGGGATTTTTCATATTTCACAAGATGGAAATCTCACAATATCAGATACAGAAGGAAACCTATATTGGTCTAACACACCTACACAAGTAGTATCTTCTCTCCCAAACCTCACATTGAAGCTGAAGCTGATGGATTCTGGCAACTTGATTCTAGGAGATGATAAATTACAAACCACCTTCTGGCAAAGCTTCGACCACCCTACTGACACATTCTTGCTGGGCATGAATATGGATAAAGATTTAACCTTGACCTCTTGGAGAGGTTCTAATGATCCTGGGAGTGGGAATTACACGTTTTTAGGTTCAAAAACAGGGGATAGCAGCTATACAATCTACAATCAGAACGAAGTTCACTGGGAAGGTGAAAATCTCCAAGATTTCGGCGGAATACTTTGGCTTCTGACCAACTTCAGCCCTCATGCTTATACAATTGGAAACAAAAACATGTCAACAATTCCAAAACGTTCTGGTTTTGAGTATGAAAGGCTAGTGATGAATCATACAGGGAAGATAGAGAGTTGGCGCTGGGATGAGACCGAAGGAAGATGGACGTCCAGTTGGAAAAGGCCAGAAAACAATTGCCAGATTTATAACCACTGTGGGAACTTTGGAAGTTGCAATACTAAAAGCAACAACCCACTATGTAGATGTTTGCCTGGGTTCATTTCCAAGTCTCCGGGGCAGAATCAGATTCCTTCCTCTAAATATGGAGGGTGTTTCAGGAAAACAACAACATGCGGCCAAAACACGACAGCATTCATAGACTTGAAGAACGTGAAGGTGAGAAAGCCAGACAAGAAAGTCTACGCAGCTAACGAAACAGAGTGCCGATCTATGTGCCTCAACGGGACAGGGTGCCCCAATTGCACCGCCTATTCATATGAAGCATCTACTTTTACTTATAAAATGATGTCCGAACACTGTTCTATCTGGACTACTCACTTACCTACCATTCAAGGAGAGATTGATGAGGGCTTTAATCTCTCTGTCCCAGTGAATAAACGAGATTTAGAGCCAACTCCAAGAACGTGCAAACCTTGCGGTGTATTCACAATTCCTTATCCGCTGAGCACTGAACCAAGTTGTGGTGATCCCAGTTACTTCAGTTTCAAATGTGACTTCCCCACCGGGCAAGTTAGTTTCAATGTGGGGGATAAGAGTTATGAAATTACTAATATTGATCCAGACAAGAGATCGTTCTCTATTCAAATCCCTGGTTCGGAGGATTGTGGTGCAAGCAATCTCGGGCTTTATCCGCCATTTAGTGCAACTCAACAGTGCAGTGATGGTGATGGTGATGAAGTAAAGACATTAGAGATTAATTGGTCTTCCCCACATGAACCTCCCTGTAATAACTCCATAGACTGCAAGGACTGGTCTCATTCAACTTGCAAGGCAACCATAAATGGAGATAGAAGATGCCTCTGCCACAAAAAATATCAATGGGATGGCGTTAATTTGAGCTGTATTCAAGAGCAAACAAGAAGAAAAAGCTCTGAAGTTTTGATATTAGCGGTGACATTTTCAAGCTTGATTTTCTTGGCCTGCATTATAACTTCTGCTTACATTTGGAGAAGAAAAGTATCCTTTAAGCAAGAAGCGGGACAAAATCAAAGAAAGAGAGAGAGCCTTCAAGATAGTGAGAGATATATCAAAGATTTCATAGACTCCACAAGGTTAGAGGAGAACGACAGTGAAGGGATAGAGGTGCCTTATTTTGATTTTAACAGCATCCTATTAGCCACAGATAACTTCTCAGACGAGAACAAGCTTGGAAGTGGGGGTTATGGACCTGTCTACAAGGGAAAAATTCAAGGAGGTCAGGATATTGCAGTAAAGAGGCTTTCAAGTGTTTCTTCACAAGGATTGAAGGAATTCAAGAATGAAGTTGTCTTGATATCTAAACTGCAACATCGAAACCTTGTAAGGCTTAGGGGGTATTGCATAACAGGAGAAGAAAAAATATTACTTTATGAATACATGCCAAACAAGAGCTTAGATACATTCTTATTTGATCGTACACAGAGAGTGGTTTTGGATTGGCCAATGCGTTTTGATATAATTCTAGGAGTTGCCAGAGGGATGTTATATCTTCATCAAGACTCTAGATTGAGAGTGATTCATAGAGATTTGAAAACTAGCAACATTCTTTTGGATGAGGAGATGCAACCAAAAATTTCGGACTTTGGACTAGCAAAAATATTTGGAGGCAAGGAGATTGAGGCTAATACCGAGAGAGTAGTAGGAACTTATGGATATATGGCTCCAGAGTACGCATTGGATGGATTTTTCTCAATCAAATCAGATGTTTTTAGCTTTGGTGTTGTGATGCTTGAAATTATCAGCGGAAAAAAGAACACGGGATTCTTTCAATCCAATCAAACTTCAAGCCTTCTGGGTTATGCATGGAGGCTATGGACAGAGAATAACTTGTTGGATTTAATGGATCGATCTTTGGTTGAAAGCTGTAATGCAAATCAATTCATAAAGTGTGCACAAGTGAGTCTGTTATGCGTACAAGATGAACCAGGAGAGAGGCCCACCATGTACCAAGTATTGATAATGCTTGAAAGTGAGATTGCAAGCCTCCCAACTCCAAGGCAACCAACCTTTTTTATGCCAAGAGGCCTTTCTATCTCCACCTCTTCTTCCAGTAAACCTGAAGGAATTCTTCCAACCGACGCTAGCTATCAAGTAGGTCGGTAG 2973 0.4131 MKAHVLLCASLLCFPLFCLASNTLKMGQNLTHRGNDTSGNLVSTGNQFELGFFSPIGTSNRYLGIWYHEKEPQTLVWVANRDDPIPHSKAGIFHISQDGNLTISDTEGNLYWSNTPTQVVSSLPNLTLKLKLMDSGNLILGDDKLQTTFWQSFDHPTDTFLLGMNMDKDLTLTSWRGSNDPGSGNYTFLGSKTGDSSYTIYNQNEVHWEGENLQDFGGILWLLTNFSPHAYTIGNKNMSTIPKRSGFEYERLVMNHTGKIESWRWDETEGRWTSSWKRPENNCQIYNHCGNFGSCNTKSNNPLCRCLPGFISKSPGQNQIPSSKYGGCFRKTTTCGQNTTAFIDLKNVKVRKPDKKVYAANETECRSMCLNGTGCPNCTAYSYEASTFTYKMMSEHCSIWTTHLPTIQGEIDEGFNLSVPVNKRDLEPTPRTCKPCGVFTIPYPLSTEPSCGDPSYFSFKCDFPTGQVSFNVGDKSYEITNIDPDKRSFSIQIPGSEDCGASNLGLYPPFSATQQCSDGDGDEVKTLEINWSSPHEPPCNNSIDCKDWSHSTCKATINGDRRCLCHKKYQWDGVNLSCIQEQTRRKSSEVLILAVTFSSLIFLACIITSAYIWRRKVSFKQEAGQNQRKRESLQDSERYIKDFIDSTRLEENDSEGIEVPYFDFNSILLATDNFSDENKLGSGGYGPVYKGKIQGGQDIAVKRLSSVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCITGEEKILLYEYMPNKSLDTFLFDRTQRVVLDWPMRFDIILGVARGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLAKIFGGKEIEANTERVVGTYGYMAPEYALDGFFSIKSDVFSFGVVMLEIISGKKNTGFFQSNQTSSLLGYAWRLWTENNLLDLMDRSLVESCNANQFIKCAQVSLLCVQDEPGERPTMYQVLIMLESEIASLPTPRQPTFFMPRGLSISTSSSSKPEGILPTDASYQVGR 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0627 990 SMART blect_4 21 156 IPR001480 -
Mibi07g0627 990 Pfam S-locus glycoprotein domain 237 313 IPR000858 GO:0048544
Mibi07g0627 990 SMART ntp_6 337 421 IPR003609 -
Mibi07g0627 990 SMART serkin_6 674 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0627 990 MobiDBLite consensus disorder prediction 968 990 - -
Mibi07g0627 990 Pfam D-mannose binding lectin 74 170 IPR001480 -
Mibi07g0627 990 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 121 969 - -
Mibi07g0627 990 ProSiteProfiles Bulb-type lectin domain profile. 21 153 IPR001480 -
Mibi07g0627 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Mibi07g0627 990 ProSiteProfiles Protein kinase domain profile. 674 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0627 990 Pfam Protein tyrosine and serine/threonine kinase 677 942 IPR001245 GO:0004672|GO:0006468
Mibi07g0627 990 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 750 953 - -
Mibi07g0627 990 ProSiteProfiles PAN/Apple domain profile. 335 433 IPR003609 -
Mibi07g0627 990 SUPERFAMILY Protein kinase-like (PK-like) 656 973 IPR011009 -
Mibi07g0627 990 Gene3D Transferase(Phosphotransferase) domain 1 750 953 - -
Mibi07g0627 990 FunFam Receptor-like serine/threonine-protein kinase SD1-8 16 153 - -
Mibi07g0627 990 CDD B_lectin 41 156 IPR001480 -
Mibi07g0627 990 Gene3D - 18 155 IPR036426 -
Mibi07g0627 990 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 639 749 - -
Mibi07g0627 990 Gene3D Phosphorylase Kinase; domain 1 638 749 - -
Mibi07g0627 990 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 209 IPR036426 -
Mibi07g0627 990 ProSiteProfiles EGF-like domain profile. 279 316 IPR000742 -
Mibi07g0627 990 CDD STKc_IRAK 680 946 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0627 Mibi-ChrMibi07 7703377 7707706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0627 646 962 Receptor kinase-like Gene Family AT4G05200 54.375 5.82e-121 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g0627 PK_Tyr_Ser-Thr 9.7e-47 CL0016