Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0619 ATGAACCATACTGGAAATATCGAATTTCAAAGTTATGATTATAATCTTGGAAGAGGTTGGTCAACGGGATTTAGTGAACCATCTAGTGAGTGTAAGAAATATGACGCTTGTGGGAGCTTTAGCAGTTGCAATGATCAGAATCTCCGAGTGTGCAAGTGTTTGCCTGGATTTCAACCAAAGTCACTTTCGGATAATTCCTCCGGAGAACTGTCTGACGGGTGTTTCAGAAGAACAACATCGTGCGAAAGAAAAGATACTGCCTTCTTAAACTTAACGAATGTTGAAATTAGGAGCTCGGACATGCAATTCATAGTAGGAAAAGAAGCAGATTGCCAATCTATCTGCATTGACGCGTGTCCTAAATGCCAGGCTTATTCGTATAATGCTAGATTCTCGGATCGCAGTCCTCAAGTTTGCTCGATCTGGACTGGGAATTTACCTACTCTTCAAGAACATTCCCTTCAAAATGGCATTTCTCTTTCTGTCCGGTTAATGATTTCAGACATAGCATTAAATGCTAGGACATGTGAACCTTGCGGCACAACAATTGTTCCATATCCACTAAGCACTGGGCCAAATTGTGGAGACCCCTTGTACTTCAAGTTAAACTGTGACAATTCAAGCGGCGAGGTTAACTTCATGATTCCTACACGTGGACCAAGTCGTGTAGCTGACATAAAATCAGATGATCGGAAGTTGATTATCCAAATTCAGGTTTCAGACATCTGTAATATTAAAGAGAACCAAAGATTTCAGCTTGATTCACCGTTTAATGTAACCAACTGGTGCATTGGTCAAGGTCTAATAGAGGTCAGTTGGCTTCCACCATTAGAACCTCTCTGTAATAACTCCACAGACTGCAACGATTGGCCACATTCAACCTGCAGCTATGATTTAAGAGATGGAAAACAAAGGTGTCTTTGTAATAAAAACTATTACTGGAACAACTCGACTCTAAATTGCACCTCAGGTGTCCCCTCCACGTCACAAGAATTATCTGGAAGAAAAAAACCACTCACTCTAATTCTTGTGGCAACTCTCTTAAGTGGAGCTTTTGTGGCATGCGTGGTTATTTTTGCCTATATATGGAAAAGGAGAATGGCCCATAAGAAAGACAGGGGAAGGGTTCAGAGAATTCGAGGGATGTATGACAGCGAAAGACAAGTGAAAGATTTAATAGACTTGGAAGAACTAGAAGAAAATGATAATGAAGGAATTGAGGTACCATATTATGATTTTCAAACGATACTAGCAGCTACAGATAACTTTTCAGATGCAAACAAGCTAGGACGAGGAGGTTATGGCCCTGTTTATAAGGGTATATTACCAGGTGAGCAATATATTGCAGTAAAGAGGCTCTCAAATGTTTCATCACAAGGTTTAAAAGAATTCAAGAATGAGGTTGTTTTGATCTCCAAACTACAGCACCGAAATCTTGTCAAACTTCGAGGCTATTGCATAACCGGAGATGAAAAAATATTACTTTATGAATACCTGCCAAACAAGAGCCTGGACACATTTTTATTCGATCCAACACAGGGTGTGATTTTAGATTGGCAGATGCGGTTTGACATAATTCTTGGAGTTGTTCGAGGCATGTTATATCTTCATCAAGATTCCAGATTAAGAGTAATTCATAGAGACTTAAAAACCAGTAACATTCTTCTTGATGAGGAGATGAAACCAAAAATATCTGATTTTGGTTTGGCTAAAATATTTGGAAACAAAGAAATTGTGGCCAGCACGGAGAGAATAGTTGGAACTTATGGTTATATGGCTCCAGAGTATGCATTAGACGGGTTACTTTCAATCAAATCAGATGTCTTCAGTTTTGGTGTGGTGGTACTTGAAATCATTAGCGGAAAAAAGAACACAGGATTCTTTCAATCCAAGCAAGCTTCAAGCCTTCTGGGTTATGCATGGAGGCTATGGACAGAGAATAAGCTTTTGGATTTAATGGATCCATCTTTGAGTGAAAGCTGTGATGCAAATCAATTCATTAGGTGTGCAGAAGTTAGTTTGTTGTGCATACAAGATGAACCAGGAGATAGGCCTAGAATGTCTCAGGTATCACTAATGCTTGAAAGTGAGACTGCAAGCTTCCCAACTCCAAAGCAACCAACTTTTTTTATGACAAGAGACAGAGGACTTTCTAGCTCTGCTTCGTCCAGTAAACCTGAAGAAATTCTTATAACTGAGAGTACCTATAAGGAAGGTCGATAG 2223 0.3959 MNHTGNIEFQSYDYNLGRGWSTGFSEPSSECKKYDACGSFSSCNDQNLRVCKCLPGFQPKSLSDNSSGELSDGCFRRTTSCERKDTAFLNLTNVEIRSSDMQFIVGKEADCQSICIDACPKCQAYSYNARFSDRSPQVCSIWTGNLPTLQEHSLQNGISLSVRLMISDIALNARTCEPCGTTIVPYPLSTGPNCGDPLYFKLNCDNSSGEVNFMIPTRGPSRVADIKSDDRKLIIQIQVSDICNIKENQRFQLDSPFNVTNWCIGQGLIEVSWLPPLEPLCNNSTDCNDWPHSTCSYDLRDGKQRCLCNKNYYWNNSTLNCTSGVPSTSQELSGRKKPLTLILVATLLSGAFVACVVIFAYIWKRRMAHKKDRGRVQRIRGMYDSERQVKDLIDLEELEENDNEGIEVPYYDFQTILAATDNFSDANKLGRGGYGPVYKGILPGEQYIAVKRLSNVSSQGLKEFKNEVVLISKLQHRNLVKLRGYCITGDEKILLYEYLPNKSLDTFLFDPTQGVILDWQMRFDIILGVVRGMLYLHQDSRLRVIHRDLKTSNILLDEEMKPKISDFGLAKIFGNKEIVASTERIVGTYGYMAPEYALDGLLSIKSDVFSFGVVVLEIISGKKNTGFFQSKQASSLLGYAWRLWTENKLLDLMDPSLSESCDANQFIRCAEVSLLCIQDEPGDRPRMSQVSLMLESETASFPTPKQPTFFMTRDRGLSSSASSSKPEEILITESTYKEGR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0619 740 CDD STKc_IRAK 429 695 - -
Mibi07g0619 740 PIRSF SRK 237 739 IPR024171 GO:0004674
Mibi07g0619 740 PIRSF SRK 1 184 IPR024171 GO:0004674
Mibi07g0619 740 ProSiteProfiles Protein kinase domain profile. 423 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0619 740 SUPERFAMILY Protein kinase-like (PK-like) 405 724 IPR011009 -
Mibi07g0619 740 Gene3D Transferase(Phosphotransferase) domain 1 499 705 - -
Mibi07g0619 740 MobiDBLite consensus disorder prediction 698 740 - -
Mibi07g0619 740 MobiDBLite consensus disorder prediction 698 730 - -
Mibi07g0619 740 SMART serkin_6 423 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0619 740 Pfam S-locus glycoprotein domain 1 61 IPR000858 GO:0048544
Mibi07g0619 740 Pfam Protein kinase domain 424 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0619 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Mibi07g0619 740 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 388 498 - -
Mibi07g0619 740 Gene3D Phosphorylase Kinase; domain 1 386 498 - -
Mibi07g0619 740 ProSiteProfiles PAN/Apple domain profile. 81 165 IPR003609 -
Mibi07g0619 740 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 499 702 - -
Mibi07g0619 740 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0619 Mibi-ChrMibi07 7629366 7632515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0619 412 711 Receptor kinase-like Gene Family AT4G23140 56.863 9.41e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g0619 Pkinase 4.7e-43 CL0016