Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0574 ATGAACGACCTTCTTTCTGATTCATTTTCTGGCGACACTAGGGGGCAGCCTTCTCGACAAAGTGATATTGAGATGGGAACTCAGGATATGGGAATGGATGCTTTTAACAAGCAGATTGCAGAGGCTGATAAACAGGTTGATAAGCTGTCTGGGCTACTTAAAAAACTGAAGGAAGCCAATGAGGAGTCCAAAGCTGTGACAAAAGCTTCAGCCATGAAAGCTATCAAGAAGAGGATGGAAAAAGATATTGATGAAGTTGGAAAGATTGCACGTATGGTCAAAACAAAAATAGAAGCTATAAACAAAGATAATCTAGCCAACAGGCAGAAGCCTGGTTGTGAGAAGGGAACTGGTGTTGACAGAGCGAGGATGAACATGACAAATTCATTGACAAAAAGGTTTAAGGATTTAATGACAGAGTTTCAGACTCTTAGACAAAGAATACAAGATGAATACCGCGAGGTGGTGGAGAGAAGAGTTATTACAGTCACGGGAACTAGACCAGATGATAAGACAATTGACCAACTAATAGAAACTGGAAGCAGTGAGCAAATCTTTCAGAAGGCTATGCTAGAAACAGGACGAGGACAGGTGTTAAATACAGTGGAAGAAATTCAGGAGCGACACGATGCTGTGAAGGAAATTGAGAAAAAGCTTCTTGATTTACACCAGATATACCTTGACATGGCAGTGTTGGTTGATGCTCAAGGGGAAATTTTAGATAACATTGAAAGTCAGGTCAACAATGCAGTCGATCATGTCCAGAGAGGGACATCTGTGCTACAAAATGCTAAGAAACTGCAGAAGAACTCTCGAAAATGGATGTGCATTGCCATCATTATACTATTAGTGATAGTAGCTATTATAGTTGTTGGTGTTATCCAACCTTGGAAGAGTAGCAAGGGCGCTTGA 912 0.409 MNDLLSDSFSGDTRGQPSRQSDIEMGTQDMGMDAFNKQIAEADKQVDKLSGLLKKLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIARMVKTKIEAINKDNLANRQKPGCEKGTGVDRARMNMTNSLTKRFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDKTIDQLIETGSSEQIFQKAMLETGRGQVLNTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVNNAVDHVQRGTSVLQNAKKLQKNSRKWMCIAIIILLVIVAIIVVGVIQPWKSSKGA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0574 303 PANTHER SYNTAXIN 32 282 IPR045242 -
Mibi07g0574 303 MobiDBLite consensus disorder prediction 1 28 - -
Mibi07g0574 303 Pfam Syntaxin 35 237 IPR006011 GO:0016020
Mibi07g0574 303 Pfam SNARE domain 238 290 IPR000727 -
Mibi07g0574 303 MobiDBLite consensus disorder prediction 1 25 - -
Mibi07g0574 303 CDD SNARE_syntaxin1-like 201 262 - -
Mibi07g0574 303 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 202 264 IPR000727 -
Mibi07g0574 303 CDD SynN 32 189 IPR006011 GO:0016020
Mibi07g0574 303 Coils Coil 32 69 - -
Mibi07g0574 303 FunFam Syntaxin 132 27 156 - -
Mibi07g0574 303 Gene3D - 27 156 - -
Mibi07g0574 303 FunFam Syntaxin 132 195 295 - -
Mibi07g0574 303 SMART SynN_4 27 153 IPR006011 GO:0016020
Mibi07g0574 303 SUPERFAMILY t-snare proteins 29 257 IPR010989 GO:0016020|GO:0016192
Mibi07g0574 303 Gene3D - 195 295 - -
Mibi07g0574 303 SMART tSNARE_6 197 264 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0574 Mibi-ChrMibi07 7049329 7052902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0574 1 303 SNARE and Associated Proteins AT3G03800 60.968 9.21e-124 354