Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0571 ATGCCTGCCGGGATTATGATTCCGGCGAGAAATATGCCATCTTTGATCGGAAGGAACAACAATCTTCTTCCTGCTACTGCCTTTGGATCATCCTCTGCTCTTTCTCTTGCTCAGCAGCCAAACTTGATGGATGGGCATCATCATGGCCATGGCCAGCTCCTCCCACCACTTGACATGGCTCCTAACACATCGGAGAGTGACATCCCCCGAATCCGGGACGACGATTTCGACACAGCCACTAAGTCCGGTAGCGAAAACCAAGACAACGTTGGCTCCGGTGACGACCAAGACCCTCGTCCCAACAAGAAGAAGCGTTACCACCGCCACACTCAACACCAGATCCAGGAAATGGAAGCTTTCTTCAAGGAGTGCCCTCACCCTGATGACAAGCAAAGGAAGGAGTTGAGTCGTGAATTAGGGTTGGAGCCATTGCAGGTCAAGTTCTGGTTTCAAAATAAACGCACTCAAATGAAGAACCAACATGAGAGGCATGAGAATTCACATCTTAGGGCTGAAAACGAGAAGCTTCGTGCGGATAATATGAGGTACAGGGAAGCCCTTGGCAATGCGTCTTGTCCTAACTGTGGTGGACCGACAGCTATAGGGGAAATGTCCTTCGATGAGCATCATTTGAGAATCGAAAATGCTCGCCTAAGAGAAGAGATTGATAGAATTTCAGCAATTGCTGCCAAGTACGTAGGGAAGCCAGTGGTGAACTATCCTCTACTTCCTCCATCTTCAGTCCCACCTCGTCCTTTAGAGCTCGGGGTTGGCGGCGGCGGCGGCGGCTATGGCGGACAGACCGGGGACATGTACGGAGGAGGAGCCGGAGATCTATTGAGGTCAATAAGCGGCCTCACCGAAGCCGATAAGCCTATGATCATAGAGCTTGCGGTTGCAGCCATGGAAGAACTTGTGAGAATGGCTCAGATGGGTGAGCCTCTTTGGATGACCACCCTTGATGGTTCCACCGTAGTGCTCAATGAGGACGAGTACATGAGATCATTCCCTCGTGGAATTGGCCCTAAACCCACTGGCTTGAAATGTGAAGCTTCTAGAGAAACTGCTCTTGTCATCATGAATCACATCAACCTCGTCGAGATTCTCATGGATGTGAACCAGTGGTCGACAGTGTTCTCTGGTATAGTGTCAAGAGCAATGACTATGGAAGTACTATCAACCGGGGTGGCTGGTAACTACAACGGTGCATTGCAAGTGATGACAGCAGAGTTACAAGTGCCTTCACCTTTAGTGCCAACTCGAGAGAGTTATTTCGTGAGGTATTGTAAGCAGCACGCTGATGGAACATGGGCTGTAGTGGATGTGTCTCTCGATCATCTCAGCACTGCTCCTGTCAAATGTAGAAGACGACCTTCTGGTTGCTTAATCCAAGAAATGCCCAATGGCTATTCCAAGGTGACATGGATTGAACATGTAGAAGTGGATGACAGAGGTGTGCATAATCTATACAAGCAGCTTGTAAGTTCAGGCCACGGTTTTGGTGCAAAAAGATGGGTTGCCACCTTAGATCGACAGTGCGAAAGGCTTGCTAGTGCCATGGCTTCCAACATTCCCACCGGTGATGTTGGAGTGATAACAAACCAAGATGGAAGGAGGAGTATGTTGAAGCTGGCGGAGAGAATGGTGATAAGCTTCTGTGCAGGAGTGAGTGCTTCCACTGCTCACACATGGACCACACTCTCTGGAACCGGGGCGGACGATGTACGGGTCATGACCCGAAAGAGCGTTGATGACCCGGGAAGACCTCCTGGTATTGTTCTCAGTGCTGCAACCTCATTTTGGCTCCCAGTTCCCACAAAGCGAGTCTTTGATTTCCTCCGTGACGAAAACTCCAGAAGCGAGTGGGATATTCTTTCCAATGGTGGTGTGGTTCAAGAAATGGCACACATAGCTAATGGACGTGATACTGGGAACTGTGTGTCCCTCCTCCGAGTGAATAGTGCCAATTCGAGCCAAAGCAATATGCTGATACTGCAAGAGAGCTGCACGGACTCAACGGGGTCTTTTGTGATATATGCACCTGTGGACATAGTAGCAATGAACGTGGTTTTGAATGGAGGGGATCCTGATTACGTGGCACTCCTTCCTTCGGGTTTTGCTATCCTCCCCGATGGTAGCACAGCTCATGGAGGTGGTGGCATTGGTGAAACAGGCCACGGTGGATCCCTCTTGACTGTTGCTTTTCAAATCTTGGTTGATTCTGTGCCCACTGCTAAGCTCTCTCTTGGATCTGTTGCAACTGTCAATAACCTTATTGCCTGCACTGTGGAGAGGATTAAGGCTTCATTATCCTGTGAAGCTGCTTAA 2328 0.4961 MPAGIMIPARNMPSLIGRNNNLLPATAFGSSSALSLAQQPNLMDGHHHGHGQLLPPLDMAPNTSESDIPRIRDDDFDTATKSGSENQDNVGSGDDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSHLRAENEKLRADNMRYREALGNASCPNCGGPTAIGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPVVNYPLLPPSSVPPRPLELGVGGGGGGYGGQTGDMYGGGAGDLLRSISGLTEADKPMIIELAVAAMEELVRMAQMGEPLWMTTLDGSTVVLNEDEYMRSFPRGIGPKPTGLKCEASRETALVIMNHINLVEILMDVNQWSTVFSGIVSRAMTMEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDHLSTAPVKCRRRPSGCLIQEMPNGYSKVTWIEHVEVDDRGVHNLYKQLVSSGHGFGAKRWVATLDRQCERLASAMASNIPTGDVGVITNQDGRRSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPTKRVFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGSTAHGGGGIGETGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0571 775 MobiDBLite consensus disorder prediction 41 112 - -
Mibi07g0571 775 CDD homeodomain 103 161 IPR001356 GO:0003677
Mibi07g0571 775 SUPERFAMILY Homeodomain-like 91 160 IPR009057 -
Mibi07g0571 775 FunFam Homeobox-leucine zipper protein HDG1 90 176 - -
Mibi07g0571 775 SUPERFAMILY Bet v1-like 535 767 - -
Mibi07g0571 775 Gene3D - 365 506 IPR023393 -
Mibi07g0571 775 ProSitePatterns 'Homeobox' domain signature. 135 158 IPR017970 GO:0000981|GO:0006355
Mibi07g0571 775 SMART HOX_1 101 164 IPR001356 GO:0003677
Mibi07g0571 775 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 101 770 IPR042160 -
Mibi07g0571 775 SMART START_1 296 515 IPR002913 GO:0008289
Mibi07g0571 775 Coils Coil 154 186 - -
Mibi07g0571 775 Pfam START domain 297 515 IPR002913 GO:0008289
Mibi07g0571 775 ProSiteProfiles START domain profile. 287 518 IPR002913 GO:0008289
Mibi07g0571 775 Gene3D - 88 177 - -
Mibi07g0571 775 FunFam Homeobox-leucine zipper protein GLABRA 2 296 514 - -
Mibi07g0571 775 SUPERFAMILY Bet v1-like 288 517 - -
Mibi07g0571 775 MobiDBLite consensus disorder prediction 67 81 - -
Mibi07g0571 775 CDD START_ArGLABRA2_like 291 514 - -
Mibi07g0571 775 ProSiteProfiles 'Homeobox' domain profile. 100 160 IPR001356 GO:0003677
Mibi07g0571 775 Pfam Homeodomain 103 159 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0571 Mibi-ChrMibi07 6981390 6986974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0571 71 775 Homeobox Transcription Factor Family AT1G05230 81.497 0.0 1168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi07g0571 START 2.5e-58 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0361 01 3493615 3497961 Mibi07g0571 07 6981390 6986974 CCT
Mibi07g0571 07 6981390 6986974 Mibi07g0571 07 6981390 6986974 ECH