Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0568 ATGATTATGGGGAGGTTTCTGTTCCTCCTGTTTTTCTGTCTGTGGATTTCCACAGAAGTGGTGGCTAGAACCGGGAATACTATTACAAACAACACTAAAGTTCCTCCAAAGCCAAGCGTTGTGAGAATCGGAGTTCTGTTTACCCTCAATTCAGTCATTGGAAGATCAGCTAAACCTGCAATTTTAGCTGCCATCGAGGATGTTAATAATGATACAAACATTCTTCCTGGCACAAAAGTGGAAATTGTTTTGACTGATACAAACTGCAGCGGGTTTATCGGCACAGTGGACGCTCTGCAGTTGATGGAGAAAGATGTGTTTGCTGCTATTGGTCCACAATCATCTGGAATAGCTCATGTCATTTCTCATGTTGTTAATGAGCTCCATGTGCCTCTTCTATCATTTGGGGCTACAGATCCTACCCTTGCTGCTCTGCAGTACCCATATTTTGTTCGCACTACCCAGAATGACTATTTTCAGATGAATGCAATAGCAGACTTGATTGACTACTTTGGGTGGAAGGAGGTGGTTGCCATCTTTGTAGATGATGATAATGGAAGAGGTGGGATTTCAGCTCTAGGTGATGCACTTGCAAAGAAGCGTGCCAAGATCTCTTTTAAGGCTGCCATACCTGCTGGAGCCTCTACAAGTAACATCAGCGACTTGTTGAATGCAGTAAACTTAGTGGAAGCACGGGTCTATGTTCTCCATGTTAACCCTGATTCAGGTTTGTCCTTTTTTTCAACTGCAAAGAAAATTGGTATGACGGGCAATGGTTATGTTTGGATTGCGACAGACTGGCTTGCTTCGGTTCTAGATGCATCAGAACCTGCTGATCCTGACACAATGAGTCTCTTACAAGGGGTCATTGCCTTACGTCATCATACTCCCGACACTGATCTTAAGAATAGGTTTATCTCTAGGCTGAAGAACAGTAAAGCCAAGGACACTACTAGCTTTAATTCCTATGCATTATATGCATATGATTCAGTTTGGTTAGCAGCACGTGCTCTTGATGCATATCTCAATGAAGGTGGAAATATATCTTTCAGTAGTGACCCCAGATTGAGTGACACAAATGGAAGCACATTGCATTTAGCATCACTTCGTACTTTTGATGGCGGGGCACGGTTTCTCCAGAAAGTCCTGTCAATGAACTTCACTGGTCTGAGTGGTCAGATTCAGTTTGATGCAGACAAGAATTTAATCCATCCAGCATATGATATTCTAAACATTGGTGGATCTAGCCGTAAAATTGGTTATTGGTCTAATTACTCCGGCTTGTCAGTTGTAGCACCTGAAATTTTATATACAAAACCACGTAACCTTTCATCTAGCAATCAGCATCTTTATGGTGTGATATGGCCGGGAGAGACTACAGCAACACCCCGGGGATGGGTGTTTCCCAACAATGGAAAGCCTCTGCGAATTGCAGTACCAAACAGAATAAGCTATGTGGAGTTTGTTTCCAAAAGCAACCATCCCCCAGGAGCACAAGGTTACAGCATTGATGTATTTGAAGCAGCCATAAACCTGCTGCCTTATCCCGTCCCACGAGAATATATATTATATGGAGACGGTCAAAGAAATCCCAGCTATGATGCACTTACGAATGCCGTCGCACAAAATAAATTTGATGCAGCTGTTGGAGATCTTACAATTACCACAAACAGGACAAGGATTGTGGATTTTACTCAACCTTTCTCTGAGTCAGGGTTGGTTGTTGTTGTTGCTGTTAAGGAGGTGAAGTCAAGCCCTTGGGCGTTTCTCAAGCCATTCAATGCACAAATGTGGTGTGTCACCGGTGCCTTCTTTCTCTTTGTGGGATTTGTGGTATGGATTCTTGAGCACCGGCTCAATCATGAGTTCCGCGGTTCTAAAAGGAAACAACTTATGACCATTTTTTGGTTTAGCTTCTCAACAATGTTCTTCTCACATAGAGAAAACACTGTGAGCACTTTGGGGAGAATGGTGTTATTGATATGGCTTTTTGTGGTGTTAATCATCAATTCAAGTTACACTGCCAGCTTGACATCAATCCTCACGGTACAGCAACTATCATCTCAAATTGAAGGAATTGACAGCTTGATTTCAAGCACTCAACCTATTGGAGTTGCAGATGGGTCATTTGCAGGGGAATATCTGATAAATGAGCTGAATATAGCTAGATCTAGGATAAGGCCTTTGGAAAACCTACAGGATTATATCGATGCCCTTGAACGTGGACCACAGGGTGGAGGGGTGGCAGCAATTGTTGACGAGCTTCCATATATTCAGATATTAATGTCTAACACTAAGTGTAAATTCAGAACTGTAGGTCAGGAGTTCACTAAAGGTGGATGGGGATTTGCATTCCAAAGGGACTCTCCTCTTGCTGTGGACTTGTCAACTGCCATTCTTCAACTCTCGGAGAGCGGCGACCTGCAAAAGATCCATGACAAATGGCTCTCACAATTTACTTGTTCTGGACAAGTCAATGCTGCTGATTCAAGCCAGCTCTCTCTCAGCAGCTTCTGGGGCCTTTTTCTCATATGTGGAATTGTTTGCTTCCTTGCTCTACTTATATTCTTTATCAGGTTGTGCCTTCAATATATGAAATATATCCCAGACGATGAGGAGGCTGAAGATGTAGAGCATGTTCAGCCTGTCAGTGCTAGAAGGTCAATCAGACCCACCACTAGCTTCAAGAACTTAATGGGTTTTGTAGATAGAAAGGAAGCCGAAATAAAGGAGATATTGAGGGACAAGAGTAAGAAACGACGGCGCAGCCAGAGCCTAGAACGGCGTGTCAGTTATTAA 2799 0.4309 MIMGRFLFLLFFCLWISTEVVARTGNTITNNTKVPPKPSVVRIGVLFTLNSVIGRSAKPAILAAIEDVNNDTNILPGTKVEIVLTDTNCSGFIGTVDALQLMEKDVFAAIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLAALQYPYFVRTTQNDYFQMNAIADLIDYFGWKEVVAIFVDDDNGRGGISALGDALAKKRAKISFKAAIPAGASTSNISDLLNAVNLVEARVYVLHVNPDSGLSFFSTAKKIGMTGNGYVWIATDWLASVLDASEPADPDTMSLLQGVIALRHHTPDTDLKNRFISRLKNSKAKDTTSFNSYALYAYDSVWLAARALDAYLNEGGNISFSSDPRLSDTNGSTLHLASLRTFDGGARFLQKVLSMNFTGLSGQIQFDADKNLIHPAYDILNIGGSSRKIGYWSNYSGLSVVAPEILYTKPRNLSSSNQHLYGVIWPGETTATPRGWVFPNNGKPLRIAVPNRISYVEFVSKSNHPPGAQGYSIDVFEAAINLLPYPVPREYILYGDGQRNPSYDALTNAVAQNKFDAAVGDLTITTNRTRIVDFTQPFSESGLVVVVAVKEVKSSPWAFLKPFNAQMWCVTGAFFLFVGFVVWILEHRLNHEFRGSKRKQLMTIFWFSFSTMFFSHRENTVSTLGRMVLLIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGVADGSFAGEYLINELNIARSRIRPLENLQDYIDALERGPQGGGVAAIVDELPYIQILMSNTKCKFRTVGQEFTKGGWGFAFQRDSPLAVDLSTAILQLSESGDLQKIHDKWLSQFTCSGQVNAADSSQLSLSSFWGLFLICGIVCFLALLIFFIRLCLQYMKYIPDDEEAEDVEHVQPVSARRSIRPTTSFKNLMGFVDRKEAEIKEILRDKSKKRRRSQSLERRVSY 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0568 932 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 54 70 - -
Mibi07g0568 932 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 327 339 - -
Mibi07g0568 932 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 114 142 - -
Mibi07g0568 932 Coils Coil 902 929 - -
Mibi07g0568 932 FunFam Glutamate receptor 156 320 - -
Mibi07g0568 932 SUPERFAMILY Periplasmic binding protein-like II 451 817 - -
Mibi07g0568 932 SUPERFAMILY Periplasmic binding protein-like I 37 467 IPR028082 -
Mibi07g0568 932 Gene3D - 712 819 - -
Mibi07g0568 932 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 886 - -
Mibi07g0568 932 FunFam Glutamate receptor 586 716 - -
Mibi07g0568 932 FunFam Glutamate receptor 712 820 - -
Mibi07g0568 932 Pfam Receptor family ligand binding region 58 413 IPR001828 -
Mibi07g0568 932 Gene3D - 470 586 - -
Mibi07g0568 932 CDD GluR_Plant 473 816 - -
Mibi07g0568 932 CDD PBP1_GABAb_receptor_plant 42 432 IPR044440 -
Mibi07g0568 932 Pfam Bacterial extracellular solute-binding proteins, family 3 499 817 IPR001638 -
Mibi07g0568 932 Gene3D - 156 428 - -
Mibi07g0568 932 Gene3D - 587 711 - -
Mibi07g0568 932 FunFam Glutamate receptor 470 586 - -
Mibi07g0568 932 Pfam Ligand-gated ion channel 818 848 IPR001320 GO:0015276|GO:0016020
Mibi07g0568 932 SMART GluR_14 476 818 IPR001320 GO:0015276|GO:0016020
Mibi07g0568 932 PIRSF IGluLR_plant 1 931 IPR017103 -
Mibi07g0568 932 Gene3D - 60 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0568 Mibi-ChrMibi07 6960655 6964973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0568 37 783 Ion Channels AT1G05200 67.380 0.0 1084
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0358 01 3483120 3486873 Mibi07g0568 07 6960655 6964973 CCT
Mibi07g0568 07 6960655 6964973 Mibi01g0357 01 3474283 3478713 CCT
Mibi07g0568 07 6960655 6964973 Mibi07g0568 07 6960655 6964973 ECH