Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0548 ATGTCACAGCTTGGCCTTTGTGCTTTTAGGCTTGGACTAATTTCTGAGGCTCATGGCTGTCTCTCTGAGTTATATTCTGGTGGAAGGGTCAAGGAGCTGCTTGCGCAAGTTATATATCATCTAATTCTGACACTGATTGTGATGGATATTGATTCTCATCAGAGTGATGTCTCAGTTGCAACGTTAGAAAGGTTGGAACGGAGACCCCAGATGCCATATCATATGCACATTAACCTTGAGCTCCTGGAGTCAGTGCATCTCATATGTGCTATGCTTCTGGAAGTTCCAAACATTGCAGCTAATGATCATGATGCAAAGCACAAAGTTATTAGTGAGGTCAGTGAGAAGCAAACATTTACAGGCCCACCTGAAAATGTCAGAGATCATGTCATGGCTGCAACAAGGGCTCTTGGCAAGGGCGATTTCCATAAGAGTTTTGATATCATCAAGTCGATGGATGTCTGGAAATTTGTCAGGAATCATGACAAGGTGCTGGAAATGCTCAAGGAAAAAATCAAGGAGGAGGCACTAAGGACTTACCTCTTTACCTTCTCTTCATCCTCTGACTCTTTGGGCCTCGAGCAACTTACAAAAATGTTTGACCTCTCTGTTCCTCACACCCATAGCATAGTTAGCAGGATGATGATAAATGAGGAGCTGCATGCAAGGTGGGATCAACCAACTGGCTGCATTATTTTCCAGGATGTAGAACACTCAACATTGCAGGCTTTAGCCTTCCAACTTATGGATAAGTTATCTATCCTTGCAGAGAGTAATGAAAGAGCTATAGAGGCAAGGATAGGCAGGACATGTCAGGGTTCAGCACTAAGGGGAGCCCAGGTAGATGCATCTACCTGTATGGTTAGCCTTAAAGGAGTTCATACTTAG 888 0.4381 MSQLGLCAFRLGLISEAHGCLSELYSGGRVKELLAQVIYHLILTLIVMDIDSHQSDVSVATLERLERRPQMPYHMHINLELLESVHLICAMLLEVPNIAANDHDAKHKVISEVSEKQTFTGPPENVRDHVMAATRALGKGDFHKSFDIIKSMDVWKFVRNHDKVLEMLKEKIKEEALRTYLFTFSSSSDSLGLEQLTKMFDLSVPHTHSIVSRMMINEELHARWDQPTGCIIFQDVEHSTLQALAFQLMDKLSILAESNERAIEARIGRTCQGSALRGAQVDASTCMVSLKGVHT 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0548 295 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 270 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mibi07g0548 295 SUPERFAMILY "Winged helix" DNA-binding domain 162 238 IPR036390 -
Mibi07g0548 295 ProSiteProfiles PCI domain profile. 73 238 IPR000717 -
Mibi07g0548 295 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 1 105 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mibi07g0548 295 SMART PINT_4 167 255 IPR000717 -
Mibi07g0548 295 Pfam PCI domain 108 234 IPR000717 -
Mibi07g0548 295 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 167 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0548 Mibi-ChrMibi07 6600544 6601971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0548 1 268 Eukaryotic Initiation Factors Gene Family AT3G56150 64.516 6.18e-120 363