Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0542 ATGGATTGGAGCAGAGGCCATACCTTAGGCCATGGCTCCTCCGCCACCGTCTATCTCGCCACCTCCACCTCCTCCGGCTCCGATCAAATCTTCGCCGTCAAGTCAACGGAGCTCTCAAACTCTTTGTTTTTACAAAAAGAAAAGAGCATCCTATCCACTCTGTCATCTCCTCATATTGTTTCCTATAAAGGGTGTGATATTACCAGCGAAAGCAACAAGCTTTTTTACAATCTCTTCATGGAGTACATGCCCTTTGGTACTGTTCTTCAGGCGGCTCAACGACACGGTGGCCGGCTCGACTTGGACGTGGTAAAGTTCTATACTTTACAAATTTTAAAGGGGATTGAGTATTTACATTCAAATGGGTTGGTACATTGTGACATTAAGAGCACAAATATATTGGTTGGTGATCATGGGGTGAAGATTTCTGATTTTGGGTGTGCTAAGTGGGTTGATGACACGTCGGCGCCGATTAGTGGGACACCGATGTTTATGTCGCCGGAGGCGGCGCGTGGGGAAGAACAAAGCTTTGCTTGTGATATTTGGTCACTTGGGTGTTTAGTGATTGAAATTTCTTGTGGGGTTTTGCCATGGCCTAATATGGTGGACCCGAATTCGGTTCTTTATCGAATTGCGTATTCCGGCGATACGCCGGAGATTCCCGGGTTTTTGCCGGAGGAAGGGAAGGATTTCTTGGAGAAGTGTTTGAGGAGGAATCGAAGAGAGAGATGGACAGCTAGTCAATTGTTGGATCATCCTTTTGTTAAGGAATTCAATTTGAAATCTGTTGAGAGGGAGATTCGAAAATTGAATTCGAGTTCACCCACGTGTGTACTTGAGCAGGGGTTTTGGAATTCCATGGAGGAATTGGAAACTCAAGGGAATTTGATTCGCATGGGGTTGGAAAATTCGGTAGCTGATGATAGAATCAGAAGGTTAGCTGAATTCTCAGGAGAACCCACATGGACATGTGATGATAATTGGATCACAATTAGAGGAATCGATGAAGCATCAGTTTCAACCAGAGATGATGGTTTGGAAGAGTCGGTGATCAAAAGCAACATTACAAGTAGATTTAGTGGAATTAGTGATATGATTAGTACTAATTACAATTTTGAGATAGGCACTGTGAATAGGATGATGCCACAGCCTTGTATGTCAGTCTATTCATGA 1173 0.4399 MDWSRGHTLGHGSSATVYLATSTSSGSDQIFAVKSTELSNSLFLQKEKSILSTLSSPHIVSYKGCDITSESNKLFYNLFMEYMPFGTVLQAAQRHGGRLDLDVVKFYTLQILKGIEYLHSNGLVHCDIKSTNILVGDHGVKISDFGCAKWVDDTSAPISGTPMFMSPEAARGEEQSFACDIWSLGCLVIEISCGVLPWPNMVDPNSVLYRIAYSGDTPEIPGFLPEEGKDFLEKCLRRNRRERWTASQLLDHPFVKEFNLKSVEREIRKLNSSSPTCVLEQGFWNSMEELETQGNLIRMGLENSVADDRIRRLAEFSGEPTWTCDDNWITIRGIDEASVSTRDDGLEESVIKSNITSRFSGISDMISTNYNFEIGTVNRMMPQPCMSVYS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0542 390 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0542 390 ProSitePatterns Protein kinases ATP-binding region signature. 9 34 IPR017441 GO:0005524
Mibi07g0542 390 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 302 - -
Mibi07g0542 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Mibi07g0542 390 SUPERFAMILY Protein kinase-like (PK-like) 2 267 IPR011009 -
Mibi07g0542 390 CDD STKc_MAPKKK 2 255 - -
Mibi07g0542 390 Gene3D Transferase(Phosphotransferase) domain 1 2 309 - -
Mibi07g0542 390 Pfam Protein kinase domain 5 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0542 390 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0542 Mibi-ChrMibi07 6560758 6561930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0542 1 355 MAP Kinase Kinase Kinase AT2G32510 45.722 1.07e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi07g0542 Pkinase 2.6e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0340 01 3339980 3341155 Mibi07g0542 07 6560758 6561930 CCT
Mibi07g0542 07 6560758 6561930 Mibi07g0542 07 6560758 6561930 ECH