Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0538 ATGGCCAGAAGAGGGGTTGGACTCTGCATTGATTCAGATCCATCTTTGAGCTCCACTAATCCCATTGTGCTCAACTCTTTCCCTCTTGAAGACGACCTTCATCTTCCCATGGACTCTTCTCCCTCTTTCCGCACACAAACAATGGACTTCTTCTCTATCAACACCACCAAACCTTCCTCTTATTATTCCTCTTCCAACGATGATTCCTCTCCCCCTCCTCACCCTCCTCATTACAAACTCAACACTGGTCTCAGTCTCTTATTAACTACTAGCAGCGACCAATCCGAGGAGGACGAGGCCTTTGACATACATTCTACCCTTAAAGAGAAACAAGCCAAGACTAGTGAGTTGCAGAATCAGATTGCTGTTCTCCGAAGTGAGTTAGAGAAAATGAAGGGAAAGAATTATGAGCTTAAGGACACTCTTAATAAGGTTAACAATGATTACAGTGCCATGAAAGTTCATATGGATTTTATCTTATCTCGCAAGAGAAGTGATGATGATGATGAGAAACCTGAAAACGGAAGTCTAGAAGAAAAGAAACAGCATAGTGAGACTAACTTAGGAACCTTAGTACCAAGAAAATTTATAGATCTCGGATTAGCTTCTATCAGTGATGGTGATCTCCCTAATAATAGTGATCAGCCTTTGCTTTCTTCGTCCTTAAAGAGATCAAGATCACTAATGGAAATAGAACGTGGTGGCAGAATTGGCTCTGATAAGAAGGAATTCGACAAAGAGAATGTAATTGAAGAGAAAGCTGGGAAGACTCAAAAGTATAGTCCTCCCAGAAACGTTGATGATCAGGTGGAAGCCACTATGAGGAAGGCAAGAGTTTCAGTCAAAGCTCGATCAGAAGCGCCTATGATTACTGATGGATGTCAATGGAGAAAATATGGGCAAAAGATGGCAAAAGGGAATCCATGTCCTCGAGCTTATTATCGTTGCACTATGGCAGCTGGTTGTCCTGTCAGGAAACAGGTGCAGAGGTGTGCGGAGGACCAAACAATCTTGGTGACAACATATGAAGGAAATCATAACCACGCATTGCCTCCCGCAGCGATGGCGATGGCACAAACCACAACAGCAGCAGCAAAGTCGTTGCTTTCAGGATCAATGTCAAGCAATGATGGTCTGATGAACGGAAGCTTTTTTACAAGAACGACATTACTTCCTTGTTCTACAAGTAACATGGCAACTCTCTCTGCCTCAGCTCCATTCCCAACAGTTACATTGGACTTAACTGCTCCCCCAACAACACAACCTTCGACCCAATTTCAAATGCCTTTCTCAAACAATGCCCCTACTCATGGTTTCACTCAACTTTTGGCTCAAGCACTTTGTAACGGCAGTCAATCATGTTTTTCAGGGCTTCAAATGAGTAACAATGACCCCTTACAATTGACTGCTGCTATAGCAGCTAACCCTAACTTCACAGCAGCTTTGACCGCCGCTATTACTTCTATTATGGGCTCTGCTCTGCCAAAGAATGTGGACGACAATAAGGGCGATATAATAAGTGGCCACAATAATGATTCAAATTTTTCACAAAACTCAATAGGCGACACTAGATTGACTTAA 1581 0.4288 MARRGVGLCIDSDPSLSSTNPIVLNSFPLEDDLHLPMDSSPSFRTQTMDFFSINTTKPSSYYSSSNDDSSPPPHPPHYKLNTGLSLLLTTSSDQSEEDEAFDIHSTLKEKQAKTSELQNQIAVLRSELEKMKGKNYELKDTLNKVNNDYSAMKVHMDFILSRKRSDDDDEKPENGSLEEKKQHSETNLGTLVPRKFIDLGLASISDGDLPNNSDQPLLSSSLKRSRSLMEIERGGRIGSDKKEFDKENVIEEKAGKTQKYSPPRNVDDQVEATMRKARVSVKARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDQTILVTTYEGNHNHALPPAAMAMAQTTTAAAKSLLSGSMSSNDGLMNGSFFTRTTLLPCSTSNMATLSASAPFPTVTLDLTAPPTTQPSTQFQMPFSNNAPTHGFTQLLAQALCNGSQSCFSGLQMSNNDPLQLTAAIAANPNFTAALTAAITSIMGSALPKNVDDNKGDIISGHNNDSNFSQNSIGDTRLT 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0538 526 MobiDBLite consensus disorder prediction 507 526 - -
Mibi07g0538 526 FunFam probable WRKY transcription factor 31 275 352 - -
Mibi07g0538 526 Gene3D WRKY domain 275 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi07g0538 526 SMART WRKY_cls 290 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi07g0538 526 MobiDBLite consensus disorder prediction 505 526 - -
Mibi07g0538 526 MobiDBLite consensus disorder prediction 163 189 - -
Mibi07g0538 526 SUPERFAMILY WRKY DNA-binding domain 284 351 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi07g0538 526 ProSiteProfiles WRKY domain profile. 285 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi07g0538 526 Pfam WRKY DNA -binding domain 292 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi07g0538 526 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 96 502 IPR044810 GO:0003700
Mibi07g0538 526 MobiDBLite consensus disorder prediction 163 185 - -
Mibi07g0538 526 MobiDBLite consensus disorder prediction 61 81 - -
Mibi07g0538 526 Coils Coil 107 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0538 Mibi-ChrMibi07 6515179 6518124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0538 80 490 WRKY Transcription Factor Family AT1G62300 45.934 2.48e-100 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi07g0538 WRKY 3.9e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0538 07 6515179 6518124 Mibi07g0538 07 6515179 6518124 ECH