Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0516 ATGGAAATGATGGCAGCCGACCGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGGTTAGTGTCCCATGCAGCAGCTTACTGACCATAGTGACGGTTAGATGTGGGCATTGTGCCAATTTGCTATCAGTTAACGTGGGCGCTTCACTTCAATCTTTTCCTCCTCATCATCAGACTCACCCTCAGAAACAGCACCTGAGTTTTGAAGAACCAAGCAGCAAAGAACTGGGATCTTCCTCAAAATGCAGCAAGTTAGCTCCATTTGAGTCTGTAGAACATGAGCAACCTAGGATTTCTCCCATTCGCCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATTCAAAGGATTAAGGCTAGTAATCCTGACATCAGCCACAGGGAGGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTCCCTCACATTCACTTTGGACTAAAGCTGGATAATGGGAACAAGCAAGCAAAGTTGGACCAGGGAGAGGGAACTCAAAAGTCTAATGGATTCTACTGA 549 0.4536 MEMMAADRVCYVHCNFCNTILAVSVPCSSLLTIVTVRCGHCANLLSVNVGASLQSFPPHHQTHPQKQHLSFEEPSSKELGSSSKCSKLAPFESVEHEQPRISPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDNGNKQAKLDQGEGTQKSNGFY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0516 182 Pfam YABBY protein 6 158 IPR006780 GO:0007275
Mibi07g0516 182 MobiDBLite consensus disorder prediction 90 107 - -
Mibi07g0516 182 MobiDBLite consensus disorder prediction 74 88 - -
Mibi07g0516 182 PANTHER PROTEIN YABBY 6-RELATED 5 169 IPR006780 GO:0007275
Mibi07g0516 182 SUPERFAMILY HMG-box 99 151 IPR036910 -
Mibi07g0516 182 FunFam Axial regulator YABBY 103 173 - -
Mibi07g0516 182 MobiDBLite consensus disorder prediction 74 113 - -
Mibi07g0516 182 Gene3D High mobility group box domain 95 155 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0516 Mibi-ChrMibi07 6247202 6252774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0516 4 182 C2C2-YABBY Transcription Factor Family AT1G08465 65.385 7.52e-81 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mibi07g0516 YABBY 1e-71 CL0114