Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0501 ATGAAGGATCCTGTGATAACACTCACAGGAATAACCTATGACAGGGAAAGCATAGAACAATGGTTGGTCAAAGCCAAAGAACACAAGTGTCCTGTCACAAAGCAGGCATTACCTAGAGGCTCCGATCTCACTCCTAACCACACCCTCCGCCGTCTCATCCAGGCTTGGTGCTCTGAAAACGCCGTCCATGGCGTAGATCGCATCCCAACCCCTAAATCCCCTCCTACTAAATCCCTCCTCCAGAAACTCCTCAGAAATCTCAACCTCCCAAATCTCCACCAATCCGCATTGGATATGTTGCACACTCTAGCCACAGAAAACCCTAGAAACCTCAAGTGCATGGTAGAATCCAGTGTAGCCGAGTCCATGATACATCTAATCACCAACAAATCTGTTGGTTTGGGCGTGAGCAACAAATCCAGTGAATTAGGTAACGATAACACTAATTCCCTTGAACAATCTCTGAGAATCCTACGTCTTCTGTGGAGTAGTAACAATTGCGACAACATCATCAAGCCTCTTGTAGTCCATAACATCGACTTCATCAAATCGCTGACGTGGATCATCCACCTCCACGTGGACACCAACAACGTGAATTTGATAAACGAAGCAATGCCAGTTTTGAAATCCACCATAGAACTAGCGGATTCAACCCTTTTAGGAAGCTTGAAACAAGAATTCTTCAATGAAATCACAAGGGTTCTCAGGAAACACAGGTCAATCTCACAACAAGCCATGAAATCCGCCTTGCATATTCTCATAGAAACGTGTCCTTTAGGTAGAAACAGGACAAGGATAGTGGAAGCAGGGGCAGTATTTGAATTGATACAGCTTGAGCTAGAGAAAAATAATGACAACAATAATAATATAGAGAAGAACATGACGGAGCTTGTGTTTAACCTACTTGCTCAGCTATGTTCATGTGCCGACGGGAGGGAAGAATTTTTGTCGCACGCGGCGGGGATCGCGGTGGCTGAGAAGAGGATTCTGAGGGTGTCGCCGGCGACGGATGATAGGGCACTTCATGTGTTGTGGTTGGTGGCGAGGTACTCTGGCTCAAACGACGTAGTTTTGGAGATGTTGAGGGTCGGGGCTGTGTCTAAGCTTTGCATGGTGATGCAGGCAAATTGTGCTATGAGTTTGAAAGAGAAAGCGAGATCCATTCTGAGGTTGCACTCTAATGTTTGGAATGATTCGCCTTGTATTCAGGTTTATCTGTTAACCAGGCACCAAAGATGA 1239 0.4576 MKDPVITLTGITYDRESIEQWLVKAKEHKCPVTKQALPRGSDLTPNHTLRRLIQAWCSENAVHGVDRIPTPKSPPTKSLLQKLLRNLNLPNLHQSALDMLHTLATENPRNLKCMVESSVAESMIHLITNKSVGLGVSNKSSELGNDNTNSLEQSLRILRLLWSSNNCDNIIKPLVVHNIDFIKSLTWIIHLHVDTNNVNLINEAMPVLKSTIELADSTLLGSLKQEFFNEITRVLRKHRSISQQAMKSALHILIETCPLGRNRTRIVEAGAVFELIQLELEKNNDNNNNIEKNMTELVFNLLAQLCSCADGREEFLSHAAGIAVAEKRILRVSPATDDRALHVLWLVARYSGSNDVVLEMLRVGAVSKLCMVMQANCAMSLKEKARSILRLHSNVWNDSPCIQVYLLTRHQR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0501 412 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 60 IPR013083 -
Mibi07g0501 412 PANTHER WDSAM1 PROTEIN 1 403 IPR045185 GO:0061630
Mibi07g0501 412 SUPERFAMILY ARM repeat 71 279 IPR016024 -
Mibi07g0501 412 SMART Ubox_2 1 56 IPR003613 GO:0004842|GO:0016567
Mibi07g0501 412 Coils Coil 273 293 - -
Mibi07g0501 412 Pfam U-box domain 1 60 IPR003613 GO:0004842|GO:0016567
Mibi07g0501 412 Gene3D - 61 403 IPR011989 -
Mibi07g0501 412 ProSiteProfiles U-box domain profile. 1 63 IPR003613 GO:0004842|GO:0016567
Mibi07g0501 412 SUPERFAMILY RING/U-box 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0501 Mibi-ChrMibi07 6037871 6039343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0501 1 402 U-box Gene Family AT2G35930 40.943 3.94e-95 290