Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0499 ATGGCTTCGACGTACTTTCATGGAGGCGGGAATTCAGAGATGCAACAATCTGGGGATGGATTACAGACACTTTACCTCATGAATCCAACCTACGTACCTTACTCTGACAATTCCTCCTCTTCTACCCCTAACATGCTTTTCTTCAATCCCAATTCTTCCCCTTCTCCCCACGCGCCCACTGTCCCCCACGCGCCGCCACCCTCCCGGCACCACCACCTCCTCGGCGTCATCCCGGCCAACATCGTCGGATCCGAAAACCCCGACATCGCCGCCTTCCACGGCTTCCCCACCTCCGCCACCCCTCGTGTCCATAACTTGTGGGGCCCCATGACAGATCACCAATCTCCGCCGTCTCCGGCGGGTTTCCGGCGTCCTAGTCAGCAGGGCTTGTCGCTGAGCCTTTCCTCTCAGCAGACGACGGCTTTTAATAGGTCGGTTTCCGGCGACCTCGACGTCGTCCCACCGGCCCGGGTTTCGGGTTTATCGCCGGCGGCGGCGAACCATGTCGGTGGTGGTGGTAATGATGTGCAGATTTTGGGGAACTCTCCGTCGTCGTCGTCGGTGGTGTCGAACGGGATTTCGAGTGTGCAGGGTGCGATTTTGGGGTCTAAATATCTGAAGGCGGCGCAAGAGCTTATGGATGAGGTTGTGAATGTGGGGAAGGGAGGGATAATTGAGAAAAGGGGTTTGATGGAGATGGAAGATAAGGAGATGAAGAAGACGAAAGTGATGAACAGATCATCGGAATCGGAATCTGGAGGGAATAATATTGGTGACGGTTCAAGTGGTAGCGGCGGCGATAAGCAGCAAGGATCCGAACTCAACACCGCACAAAGGCAAGAACTTCAGATGAAGAAGTCCAAGCTTGTTTCCATGCTTGATGAGGTGGAACAAAGGTACAGGCAGTATAGGCACCAAATGCAGATAGTGATATCTTCGTTTGAGCAGGCAGCTGGATATGGTGCGGCTAGGTCATACACTGCACTTGCATTAGAGACAATTTCCAAGCAATTTCGATGCCTTAAAGATGCAGTCTCTTCTCAGATCAAAGCTACAAGTAAGAGCCTTGGAGAAGAGGATTACTTGGGAGCTAAGGTACAAGGTTCGAGGCTACGGTATGTTGATCATCATCTCCGGCAACAGCGAGCTTTGCAGCAGCTCGGAATGATACAGCACAATGCTTGGAGGCCTCAGAGAGGCTTGCCTGAACGCGCTGTCTCCATTCTTCGCGCTTGGCTTTTTGAGCACTTCCTTCACCCTTATCCCAAGGACTCGGATAAAGTGATGCTTGCAAAACAAACTGGACTTACTCGCAGCCAGGTATCAAACTGGTTTATAAATGCTCGAGTTCGTCTGTGGAAACCAATGGTAGAAGAAATGTACTTGGAAGAAACCAAGGATCAGCAGAACAATGAGTCCAACAGCCCAAAGCACAACACAAATAGATCATCAAAAGAATCAAACAAGGACGCAAATAATAATAACGTTGATGCATCAGCAGCTCATGAAGAATCAGGTTCCATGAATAATATCATCAGATCATCATTTGATCAAACATTCAACAACAACCAAACCACCACTTCCTCTCTAAACGACATCGTCTCAAACAGTAATAATCCTCCACTGGGAATTATGGACATTGAAATGAAACCTCGGTTCGTTAAAGACGGTTATAACAACAACCCGTTATTAAGTGAAGAAGGTGGTTATGGAGGATTCTCAATGCAAGACATTGGAAGGTTCAACGTTAGTAATGTTTCTGAACAACATAGTTTAGCTCCAAGGTTTCATGGCAATGGTGTTTCCCTCACTTTGGGACTTCCTCATCACAATGACAACCTTTCTCTCTCTGCAACTCAACATGGTTTTCTCTCTCCTCACAATATACATTTGGGAACAAATAATGCCACTGAGCTTTGTGCCATGAACGCCGCCGCCGCCGGTGGTCCTCCTCCTCCGCCGTCTTCTCATTCCGGCGCCGGAACCGGTTATGAGAACATTGATATTCAGAACAGAAAGAGCTTTGCTACTCAGCTGTTGCAGGATTTCGTCACATGA 2058 0.4898 MASTYFHGGGNSEMQQSGDGLQTLYLMNPTYVPYSDNSSSSTPNMLFFNPNSSPSPHAPTVPHAPPPSRHHHLLGVIPANIVGSENPDIAAFHGFPTSATPRVHNLWGPMTDHQSPPSPAGFRRPSQQGLSLSLSSQQTTAFNRSVSGDLDVVPPARVSGLSPAAANHVGGGGNDVQILGNSPSSSSVVSNGISSVQGAILGSKYLKAAQELMDEVVNVGKGGIIEKRGLMEMEDKEMKKTKVMNRSSESESGGNNIGDGSSGSGGDKQQGSELNTAQRQELQMKKSKLVSMLDEVEQRYRQYRHQMQIVISSFEQAAGYGAARSYTALALETISKQFRCLKDAVSSQIKATSKSLGEEDYLGAKVQGSRLRYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKDQQNNESNSPKHNTNRSSKESNKDANNNNVDASAAHEESGSMNNIIRSSFDQTFNNNQTTTSSLNDIVSNSNNPPLGIMDIEMKPRFVKDGYNNNPLLSEEGGYGGFSMQDIGRFNVSNVSEQHSLAPRFHGNGVSLTLGLPHHNDNLSLSATQHGFLSPHNIHLGTNNATELCAMNAAAAGGPPPPPSSHSGAGTGYENIDIQNRKSFATQLLQDFVT 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0499 685 MobiDBLite consensus disorder prediction 465 507 - -
Mibi07g0499 685 Pfam Homeobox KN domain 412 451 IPR008422 GO:0003677|GO:0006355
Mibi07g0499 685 SMART HOX_1 395 459 IPR001356 GO:0003677
Mibi07g0499 685 ProSiteProfiles 'Homeobox' domain profile. 392 455 IPR001356 GO:0003677
Mibi07g0499 685 MobiDBLite consensus disorder prediction 235 278 - -
Mibi07g0499 685 MobiDBLite consensus disorder prediction 49 68 - -
Mibi07g0499 685 MobiDBLite consensus disorder prediction 107 131 - -
Mibi07g0499 685 MobiDBLite consensus disorder prediction 467 507 - -
Mibi07g0499 685 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 71 481 - -
Mibi07g0499 685 CDD homeodomain 395 456 IPR001356 GO:0003677
Mibi07g0499 685 MobiDBLite consensus disorder prediction 247 278 - -
Mibi07g0499 685 FunFam BEL1-like homeodomain protein 9 398 460 - -
Mibi07g0499 685 SUPERFAMILY Homeodomain-like 396 461 IPR009057 -
Mibi07g0499 685 Gene3D - 398 477 - -
Mibi07g0499 685 MobiDBLite consensus disorder prediction 645 665 - -
Mibi07g0499 685 Pfam Associated with HOX 200 346 IPR006563 -
Mibi07g0499 685 Coils Coil 279 306 - -
Mibi07g0499 685 SMART prehox3 194 347 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0499 Mibi-ChrMibi07 6009470 6013671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0499 3 684 Homeobox Transcription Factor Family AT2G35940 43.912 6.81e-138 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi07g0499 POX 5.6e-48 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0321 01 3142215 3145161 Mibi07g0499 07 6009470 6013671 CCT