Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0495 ATGGGAGATATCTGCATGAATTTCTACATTTTTCTCATTTTTTGGCTGATTGTGGTGGTATACGGTGCCACTGATCCAAATGATGTGAAAATTCTGAATGATTTCAGAAAAGGTTTGGAGAATCCACAACTTCTTAAATGGCCAGAAAATGGCGATGATCCTTGTGGTCCTCCTTCATGGTCTTATGTGTATTGTTCTGGTGACAGAGTCACACAGATTCAGGCCAAGTCTCTGGGTCTTAAAGGAACATTACCTCCATCCTTTAACAAGCTCTCAGAACTCTATAATTTGGGCCTTCAGCACAACAAGCTTAGTGGGATGCTGCCTACTTTTAGTGGATTATCCAAATTGCAATTTGCTTTCTTAAACGACAATCAGTTTGATGGGATCCCATCTGATTTCTTTGATGGTCTAAGCAGTATTCGAGATTTAGCTTTGGCTGAGAATCCATTGAATGCGAGTACTGGCTGGTCTCTTCCTGCAAGTTTAGAAAACTCAGCACAATTAACGAATCTTTCTCTTGTGCAATGTAATTTGGTTGGACCAGTACCTGAATTTTTGGGCAAATTACCCTCTCTCTCAAATTTGTTACTTTCATACAACCGATTGTCTGGTAGTATTCCGAGCAGCTTTGGTCAGTCTTCTATGCAGGTTTTGTGGTTGAATAACCAAGGTGGTGGTGGTGGAATGAATGGCCCAATTGATGTTATTGCTTCAATGACTTCTCTAACGCAGCTTTGGCTTCATGGAAATCAGTTCACTGGCACAATTCCAAAGAATATAGGGAATCTTACTTCCTTGATGGATCTCAACCTCAATAGTAATCAACTTGTTGGTTTGATTCCTGAAAGTCTGGCCAATATGGAACTTCAGAATTTGGTGCTAAACAATAATAGGCTCATGGGTCCTGTACCAAAGTTTAGGGCTAGAAATGTTTCTTATGATTTCAATTTCTTTTGTCAATTGAAGCCTGGCGTTGAATGTGACCCCAAGGTTACTGCTCTACTCGATTTTCTCAGTGATCTGAATTTCCCTTCAATGCTCGCTTCTCAATGGTCTGGTAATGAACCATGTACGGGGCCATGGCTGGGACTGAGCTGTAATCCCAAGTCAGAGATATCGATCATTAATTTTCCCCACCACAGGCTCAATGGTACTCTGAGCCCCTCACTTGCTAAGTTAACTTCACTCCTTGAGATCAGGCTTGGAGGAAATAATTTAACTGGCCAAATTCCTAGCAGTTTCACAGAATTGAAATCTTTGAAGCTATTGGATTTAAGTGATAATAATATTGAGCCCCCTATGCCAAATTTTCATGGTGTGAAGATTGTTCTTGATGGCAATCCTCTTTTTGCCAACCATACAGGAAGTAATCCCCAGCCTATCAGCAGCCAACCACCTTCAAGCTCACAATCTTCACCTCACAGCCCATCTCCACCCTCTGAAAGCCCACCTTCCTCAAGTCAGAGTCCAAGCTCAAATTCATCAAGGTCAGGACAAGTACAATCGCAAGAAAAGAAATCTAGAAGATTCAGAACACTAGCAATAGGGGCTGGAGCTGCAATTTTGGCCATTGCAGCTATTTTGGTTATTTTCCTACCCATATATTGCAAGAAGAAGAAGAAAACCTCATTGGATGATTCTAGTTCCATTGTCGTTCACCCTCGAGACCCATCCAATCCAGATGTGGTTAAAATTGCAGTAGCAAACAACACTGCCGGAAGCTTATCGTCTAAGGCCGGGACAAGTTCTTTGGGAAACATTAGTGGTGAATCTGAAAGCTCTCATGTGATTGATGCCGGTAATCTTATCATCTCTGTTCAAGTTTTACGCAAGGTTACCAAGAACTTTTCTCCCGAAAATGAGCTAGGCCATGGAGGGTTTGGGACTGTCTATAAAGGCGAATTAGAAGATGGGACTAAAATAGCAGTGAAGAGAATGGAGAGTGGAGTTATGAGCAGGAAAGCACTGCATGAGTTTCAGGCTGAAATCGCTGTTCTTTCTAAGGTTCGTCACCGACATTTAGTATCTCTGTTGGGATACTCCACTGAAGGCAATGAGAGACTTTTGGTGTATGAATATATGCCTTTGGGTGCTCTAAGCCGGCATCTTTTTTATTGGAAAAGCCTGAAACTGGAGCCTTTGACATGGTCTCAAAGGCTTGTGATAGCATTAGATGTTGCTAGAGGAATGGAATACCTCCACAGTCTTGCCCGCCAAACCTTCATCCATCGAGATCTCAAGCCTTCTAATATTCTTCTTGATGAAGCTTTACGGGCAAAAGTTTCAGATTTTGGCCTGGTGAAACTTGCCCCAGACGGTGAGAAATCTGTGGTAACAACGCTTGCTGGGACATTTGGATATCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACAAAGGTTGATGTGTTCAGCTACGGTGTGGTGTTGATGGAACTTTTGACTGGACTGATGGCTCTTGATGAGAGCCGGCCCGAGGAGAGCCGATACTTAGCTCAGTGGTTTTGGCAGATTAAGTCAAGCAGAGAGAAGCTTATGGCTGCCATTGATCCTGCCCTTCAGGCAAATGAGGAGACTTTTGAAAGCATCTCCATCATAGCTGAACTTGCTGGACATTGCACTGCCAGGGAGCCTAACCACCGACCTGATATGAGTCATGCAGTCAATGTATTGGCCGCATTAGTTGAGAAATGGGTACCAATCGACGACGAATTAGATTGCTTTACTGGCATTGACTTTGGACGACCACTTTCCCAGATGTTGAAGGATTGGAAGGAAGCAGGAAGCAGAGATGTTAGCTATGCTAGCCTTGAAGACAGCAAAGGCAGCATACCTGCAAAGCCTGTTGGGTTTGCAGACTCCTTTTCTTCTGCTGATGCTCGGTAA 2892 0.4326 MGDICMNFYIFLIFWLIVVVYGATDPNDVKILNDFRKGLENPQLLKWPENGDDPCGPPSWSYVYCSGDRVTQIQAKSLGLKGTLPPSFNKLSELYNLGLQHNKLSGMLPTFSGLSKLQFAFLNDNQFDGIPSDFFDGLSSIRDLALAENPLNASTGWSLPASLENSAQLTNLSLVQCNLVGPVPEFLGKLPSLSNLLLSYNRLSGSIPSSFGQSSMQVLWLNNQGGGGGMNGPIDVIASMTSLTQLWLHGNQFTGTIPKNIGNLTSLMDLNLNSNQLVGLIPESLANMELQNLVLNNNRLMGPVPKFRARNVSYDFNFFCQLKPGVECDPKVTALLDFLSDLNFPSMLASQWSGNEPCTGPWLGLSCNPKSEISIINFPHHRLNGTLSPSLAKLTSLLEIRLGGNNLTGQIPSSFTELKSLKLLDLSDNNIEPPMPNFHGVKIVLDGNPLFANHTGSNPQPISSQPPSSSQSSPHSPSPPSESPPSSSQSPSSNSSRSGQVQSQEKKSRRFRTLAIGAGAAILAIAAILVIFLPIYCKKKKKTSLDDSSSIVVHPRDPSNPDVVKIAVANNTAGSLSSKAGTSSLGNISGESESSHVIDAGNLIISVQVLRKVTKNFSPENELGHGGFGTVYKGELEDGTKIAVKRMESGVMSRKALHEFQAEIAVLSKVRHRHLVSLLGYSTEGNERLLVYEYMPLGALSRHLFYWKSLKLEPLTWSQRLVIALDVARGMEYLHSLARQTFIHRDLKPSNILLDEALRAKVSDFGLVKLAPDGEKSVVTTLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEESRYLAQWFWQIKSSREKLMAAIDPALQANEETFESISIIAELAGHCTAREPNHRPDMSHAVNVLAALVEKWVPIDDELDCFTGIDFGRPLSQMLKDWKEAGSRDVSYASLEDSKGSIPAKPVGFADSFSSADAR 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0495 963 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Mibi07g0495 963 Pfam Leucine rich repeat N-terminal domain 332 368 IPR013210 -
Mibi07g0495 963 FunFam Receptor-like kinase TMK4 26 325 - -
Mibi07g0495 963 MobiDBLite consensus disorder prediction 451 471 - -
Mibi07g0495 963 MobiDBLite consensus disorder prediction 940 963 - -
Mibi07g0495 963 SMART serkin_6 617 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0495 963 MobiDBLite consensus disorder prediction 472 486 - -
Mibi07g0495 963 PANTHER OSJNBA0070M12.3 PROTEIN 9 963 - -
Mibi07g0495 963 SUPERFAMILY L domain-like 24 306 - -
Mibi07g0495 963 SUPERFAMILY L domain-like 331 438 - -
Mibi07g0495 963 Gene3D Phosphorylase Kinase; domain 1 581 694 - -
Mibi07g0495 963 CDD STKc_IRAK 623 893 - -
Mibi07g0495 963 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Mibi07g0495 963 Gene3D Ribonuclease Inhibitor 329 454 IPR032675 -
Mibi07g0495 963 FunFam receptor protein kinase TMK1 579 694 - -
Mibi07g0495 963 MobiDBLite consensus disorder prediction 487 502 - -
Mibi07g0495 963 FunFam Leucine-rich repeat receptor-like kinase 330 454 - -
Mibi07g0495 963 SUPERFAMILY Protein kinase-like (PK-like) 597 893 IPR011009 -
Mibi07g0495 963 MobiDBLite consensus disorder prediction 450 507 - -
Mibi07g0495 963 FunFam receptor protein kinase TMK1 695 912 - -
Mibi07g0495 963 Pfam Protein kinase domain 620 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0495 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Mibi07g0495 963 ProSiteProfiles Protein kinase domain profile. 617 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0495 963 Gene3D Transferase(Phosphotransferase) domain 1 695 905 - -
Mibi07g0495 963 Gene3D Ribonuclease Inhibitor 25 321 IPR032675 -
Mibi07g0495 963 SMART LRR_typ_2 418 440 IPR003591 -
Mibi07g0495 963 SMART LRR_typ_2 264 287 IPR003591 -
Mibi07g0495 963 SMART LRR_typ_2 91 113 IPR003591 -
Mibi07g0495 963 SMART LRR_typ_2 240 263 IPR003591 -
Mibi07g0495 963 SMART LRR_typ_2 114 137 IPR003591 -
Mibi07g0495 963 SMART LRR_typ_2 190 214 IPR003591 -
Mibi07g0495 963 SMART LRR_typ_2 394 417 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0495 Mibi-ChrMibi07 5916685 5919880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0495 82 898 Receptor kinase-like Gene Family AT5G07280 31.573 3.20e-79 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mibi07g0495 Pkinase 2.6e-47 CL0016