Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0483 ATGTCTTCTTCTTCCTCTCTTCCTCCCGATCAGATCATTAACTCCATGAAACGACAACTCCCATTTTCGTCTATGAAACCTTCTTTTGATGCTTCTGCTGATTATCATCGTTTCGCGCCTGACCAACGCCGACCTGCTAACCAAGAAGACGATACCATCGTTGTTAAGTCCCCTCAATTGAAGCGAAAGATTACCACAGCCAATTCTGAAGCTGATTCCGTTGATAGGATGAACCCAGGATCTAGTGAAGCATCTGATAGTCCCTTTCAGACTCCAATGTCAGGGAAAATGGGGAAGGCAGGCAAAGCATCAAGGCTTACAAAATGCAGCAAAGCTGGGCCTCAAACCCCAGGATCAAATATCGGTTCTCCTCCTGGCAACAATCTTACTCCAGCTGGTCCATGTCGTTATGACAGCTCTTTAGGTCTGCTGACGAAAAAGTTCATCAACTTGATCAAGCAAGCTGAGGATGGTATTCTTGATTTGAATAAAGCTGCTGATACATTAGAGGTGCAAAAGAGGAGAATATATGATATAACAAACGTTCTAGAAGGGATTGGTCTTATAGAAAAGAAGCTCAAAAACAGAATTCAATGGAAGGGATTGGATGCATCGAGGCCAGGGGAGGCTGATGATAGTTTTTCTTGTCTGCAGACAGAAGTTGAAAACCTTACTTTGGAAGAGCGCCAGTTAGATGAGCAAATAAGGGAGATGCAAGAAAGACTGAGCAAACTTAGTGAAGATGAAAACAATCAGAAGTGGCTTTTTGTAACGGAAGATGATATAAAGGGTTTGCCCTGCTTCCTGAATGAAACCTTAATAGCTATTAAAGCTCCACATGGCACCACTCTTGAGGTCCCTGATCCTGATGAGGCTGTTGATTATCCTCAAAGGAGATACAGGATAATCCTCAGAAGCACAATGGGCCCAATAGATGTTTACCTTGTTAGTCAATTTGAAGAAAAGTTTGAGGAGATCAATGGAGTTGATGTGCCATCGAATCTTCCATCCAGTCCAGAGTTAAACAGGCATCCAGCAACAGTGATAACTGAGGATAGACGGGAGGACATAGAAATGAAGGAACAAGATTGTCATGGAGCTAGTTCTGATCTGAGTGCCTCACAGGACTTCGCTAGTGGGATCACGAAGATTGTTCCGTCAGATGTTGATATTGATGCTGATTACTGGCTTCTATCAAATGCTGATTGTAGCATAACAGACATGTGGAGAACGGATCCTGGCATTGAATGGAACGAACTGGATGCACTGAACGACGATTATTGCATGCCTCATGAGAGCACAGCTCCGCCTGAAACTCCTCCAAACAAGAGTCAGGTGCCTTCTACTGCAAACCCTAAAGGAGGCTGA 1368 0.4386 MSSSSSLPPDQIINSMKRQLPFSSMKPSFDASADYHRFAPDQRRPANQEDDTIVVKSPQLKRKITTANSEADSVDRMNPGSSEASDSPFQTPMSGKMGKAGKASRLTKCSKAGPQTPGSNIGSPPGNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDASRPGEADDSFSCLQTEVENLTLEERQLDEQIREMQERLSKLSEDENNQKWLFVTEDDIKGLPCFLNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIILRSTMGPIDVYLVSQFEEKFEEINGVDVPSNLPSSPELNRHPATVITEDRREDIEMKEQDCHGASSDLSASQDFASGITKIVPSDVDIDADYWLLSNADCSITDMWRTDPGIEWNELDALNDDYCMPHESTAPPETPPNKSQVPSTANPKGG 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0483 455 CDD E2F_DD 212 318 IPR032198 GO:0046983
Mibi07g0483 455 Gene3D - 209 318 - -
Mibi07g0483 455 Coils Coil 214 248 - -
Mibi07g0483 455 MobiDBLite consensus disorder prediction 59 92 - -
Mibi07g0483 455 MobiDBLite consensus disorder prediction 36 50 - -
Mibi07g0483 455 MobiDBLite consensus disorder prediction 1 133 - -
Mibi07g0483 455 FunFam E2F transcription factor 1 130 203 - -
Mibi07g0483 455 PANTHER TRANSCRIPTION FACTOR E2F 73 413 IPR015633 GO:0000978|GO:0006357
Mibi07g0483 455 MobiDBLite consensus disorder prediction 428 455 - -
Mibi07g0483 455 Pfam E2F transcription factor CC-MB domain 217 317 IPR032198 GO:0046983
Mibi07g0483 455 Coils Coil 152 172 - -
Mibi07g0483 455 SMART E2F_TDP_2 136 201 IPR003316 GO:0005667|GO:0006355
Mibi07g0483 455 SUPERFAMILY E2F-DP heterodimerization region 214 318 IPR037241 -
Mibi07g0483 455 Gene3D - 130 203 IPR036388 -
Mibi07g0483 455 MobiDBLite consensus disorder prediction 109 127 - -
Mibi07g0483 455 MobiDBLite consensus disorder prediction 1 26 - -
Mibi07g0483 455 Pfam E2F/DP family winged-helix DNA-binding domain 138 201 IPR003316 GO:0005667|GO:0006355
Mibi07g0483 455 SUPERFAMILY "Winged helix" DNA-binding domain 136 199 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0483 Mibi-ChrMibi07 5756891 5761214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0483 15 454 E2F-DP Transcription Factor Family AT5G22220 56.596 3.15e-156 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mibi07g0483 E2F_CC-MB 4.7e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0483 07 5756891 5761214 Mibi07g0483 07 5756891 5761214 ECH