Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0482 ATGTATCAGCAATTGAAGCGAAAGATTGCCACAGCCAATTCAGAAGCTGAGTCTGTTGATAGGATGAACCCAGGGTCTAATGAAGCAGCTAATAGCCCCTTTCAGACTCCAATGACAGGGAAAATGGGGAAGGCAGACAATGCATCAAAGTTTACAAAATGCAGCGAAGATGGGCCTCAAACCCCGGGACCAAATATTGGTTCTCCTTCTGGCAATAATCTTACTCAAGCTGGTCCATGTCGTTATGACGGCTCGTTAGGTCAGCTGACAAAAATGTTCATCAACTTGATCAAGCAAGCTGAGGATGGTACTCTTGATTTGAATAAAGCTGCTGATACATTAGAGGTGCAAAAGAGGAGATTATATGATATAACAAACGTTCTTGAAGGGATTGGTCTCATAGAAAAGAAGCTTAGAAACAGATTTCAAGGATTGGATGTGTCGAGGCAAGGGGAGGCTGATGATAGTTTTTCTAGTTTGCAGACAGAAGTTGAAAATCTTACTTTGGAAGAGCGCCAGTTAGATGAGCAAATAAGGGAGATGCAAGAAAGACTGAGCAAACTTAGTGAAGATGAAGACAATCAGAAGATAATCTTCAGAAGCACAATGGGCCCGATAGATGTTTACCTTGTTAGTCAATTTGAAGAAAAGCTTGAGGAGATCAATGGAGTTGATGTACCACCCAATCTTCCATCCAGTCCAGAGTTAAACAGCCATCCAGCAACAGTGATCGTTGAGGATAGAGGGATGGACATAGAAATGAAGGAACAAGAGGACTTCGTTAGTGGGATCATGAATATTCCGTCAGATGTTGATATTGATGCTGATTACTGGCTTCTATCAGATGCTGATTTTAGCATGACGGACATGTGGAGTACAGAATATTCTCATCTTGAATGTTTTGGAAATTTCCTTGATACATCTTTAGCTGGAATTGAATGGAACGAACTGGATGCGCTTATCGACGATTATTGCATGCCTCAGGAGAGCACAGCTCCGCCTGAAACTCCTCCAAACATGAATCAGGTTCCTTCTACTGCAGACCCCAAAGGAGGCTGA 1059 0.424 MYQQLKRKIATANSEAESVDRMNPGSNEAANSPFQTPMTGKMGKADNASKFTKCSEDGPQTPGPNIGSPSGNNLTQAGPCRYDGSLGQLTKMFINLIKQAEDGTLDLNKAADTLEVQKRRLYDITNVLEGIGLIEKKLRNRFQGLDVSRQGEADDSFSSLQTEVENLTLEERQLDEQIREMQERLSKLSEDEDNQKIIFRSTMGPIDVYLVSQFEEKLEEINGVDVPPNLPSSPELNSHPATVIVEDRGMDIEMKEQEDFVSGIMNIPSDVDIDADYWLLSDADFSMTDMWSTEYSHLECFGNFLDTSLAGIEWNELDALIDDYCMPQESTAPPETPPNMNQVPSTADPKGG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0482 352 Coils Coil 2 22 - -
Mibi07g0482 352 FunFam E2F transcription factor 1 75 147 - -
Mibi07g0482 352 PANTHER TRANSCRIPTION FACTOR E2F 197 295 IPR015633 GO:0000978|GO:0006357
Mibi07g0482 352 SUPERFAMILY E2F-DP heterodimerization region 157 213 IPR037241 -
Mibi07g0482 352 SMART E2F_TDP_2 81 146 IPR003316 GO:0005667|GO:0006355
Mibi07g0482 352 Coils Coil 157 191 - -
Mibi07g0482 352 Gene3D - 151 200 - -
Mibi07g0482 352 Gene3D - 76 146 IPR036388 -
Mibi07g0482 352 SUPERFAMILY "Winged helix" DNA-binding domain 81 142 IPR036390 -
Mibi07g0482 352 Pfam E2F/DP family winged-helix DNA-binding domain 83 143 IPR003316 GO:0005667|GO:0006355
Mibi07g0482 352 MobiDBLite consensus disorder prediction 1 78 - -
Mibi07g0482 352 MobiDBLite consensus disorder prediction 327 352 - -
Mibi07g0482 352 MobiDBLite consensus disorder prediction 1 38 - -
Mibi07g0482 352 MobiDBLite consensus disorder prediction 53 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0482 Mibi-ChrMibi07 5753002 5756187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0482 5 351 E2F-DP Transcription Factor Family AT5G22220 42.691 1.19e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mibi07g0482 E2F_TDP 1.8e-21 CL0123