Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0462 ATGGACTCTTCCCTCTCTTTCCCCGCAGAAATAGACTTCTTCTCTAACAACACTCTCAAGTCTTCCACCTATGATCCCTCAACTCCTCCTCTTGATTTCAAAGTAAATATTGTTGTTCTTCGATATGAGTTAGGGAGGACAGCGGCAGAAAATCATGAGCTGGAAGAAATGCTAAATAAGGTTAATAACAACTACAATGTACTAAAGACTCATATGGATTTTATAAAGTCTCGCAAGGGCAATGAAGAAGCTGATAAACCTGAAAAGGAAAGTCCAGAAGAAAACAAACAGAGTAATGAGAGTAACAGAGGAACTTTAGTGCCAAAGCAATTTATAGATTTTGGATTAGCTTCCATCAATGATGGTGATCAGGCTAATAATGGTGACGACTATTCGCTTTCTTCGCCCGTAAGGAAATCAATATCACCCTTAGAAGTGGGATGTGATGCCATAATTGGTTTTGTTCAGAAGGATTTCGATAGAGAGACTGAAAAAGGAGATGAAGTTCACAAGAATAATCAAAAGTATAATGCTACCAAAAACATTGATGATCAATTGGAAACCACCATGAAGAAGGCAAGAGTTGCAGTTAGAGTTCGATCAGAGGCGTCCATGCTTGCTGATGGATGTCAATGGAGAAAATATGGGCAGAAGATGGCCAAAGGGAATCCATGTCCTCGCGCCTATTATCGTTGTACCATGGCTTCAGGATGTCCAGTAAAGAAACAGGTGCAAAGGTGTGTAAATGATAGAACAATCTTGGTAACAACGTATGAAGGAGGTCATAACCATGCATTGCCTCCGGCAGCAATGGCAATGGCACAAACAACAAGTGCAGCAGCAAGGACATTGCTTTCAGGATCAATGTCAAGCAATGATGGTCTAATAAATGGAAGTTTTTTGACAAATACCACATCGCTTCCTTGTTATTCAAGTAGCATGGCAACTCTTTCTGCCTCAGCTCCATTTCCAACTATCACTTTGGATTTAACCATTCCTCCAACAACTCAACAACCTTCTACCAAATTTCAATTGCCCTTCTCAAATAACGCCCTTCATCATAATTTGACTCAAGTGTTTGCTCAAGCGCTTTGTGGCAGCAATCAAATGAACAATAAAGACATGTTGCAATTGAGTAATGCTATAGCAGCTGATCCTAATTTCACAGCAGCCTTAACAACGGCTATTTCTTCCATTATGGGCTCTGCTTCGCCAAATAGTGCAAGTGTTGACAATAATAACAAGGTTATGAGTAGTAATAACGATGCATGA 1272 0.4002 MDSSLSFPAEIDFFSNNTLKSSTYDPSTPPLDFKVNIVVLRYELGRTAAENHELEEMLNKVNNNYNVLKTHMDFIKSRKGNEEADKPEKESPEENKQSNESNRGTLVPKQFIDFGLASINDGDQANNGDDYSLSSPVRKSISPLEVGCDAIIGFVQKDFDRETEKGDEVHKNNQKYNATKNIDDQLETTMKKARVAVRVRSEASMLADGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVKKQVQRCVNDRTILVTTYEGGHNHALPPAAMAMAQTTSAAARTLLSGSMSSNDGLINGSFLTNTTSLPCYSSSMATLSASAPFPTITLDLTIPPTTQQPSTKFQLPFSNNALHHNLTQVFAQALCGSNQMNNKDMLQLSNAIAADPNFTAALTTAISSIMGSASPNSASVDNNNKVMSSNNDA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0462 423 MobiDBLite consensus disorder prediction 79 97 - -
Mibi07g0462 423 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 37 412 IPR044810 GO:0003700
Mibi07g0462 423 FunFam probable WRKY transcription factor 31 191 268 - -
Mibi07g0462 423 Pfam WRKY DNA -binding domain 208 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi07g0462 423 SMART WRKY_cls 206 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi07g0462 423 MobiDBLite consensus disorder prediction 403 423 - -
Mibi07g0462 423 MobiDBLite consensus disorder prediction 79 105 - -
Mibi07g0462 423 SUPERFAMILY WRKY DNA-binding domain 198 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi07g0462 423 Coils Coil 44 71 - -
Mibi07g0462 423 Gene3D WRKY domain 191 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi07g0462 423 ProSiteProfiles WRKY domain profile. 201 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0462 Mibi-ChrMibi07 5579202 5581737 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0462 40 400 WRKY Transcription Factor Family AT4G04450 44.389 5.71e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi07g0462 WRKY 2.4e-23 CL0274