Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0453 ATGGCGGCTCCTAATTACCCTGGTTTTCGCTTCTACCCCACAGAAGAAGAACTCGTCTCCTTCTACCTCCTTAACAAACTCCAAGGTCTCCGACCTGACATGGACAGAGTCATCCCTGTTGTTCAAATCCACGACGTCGAGCCTTGGAATCTCCCACAGCTTGCAGGAGAGGCGTGTCGTGGAGATACAGAGCAGTGGTTTTTTTTCTCGCCGAGGCAGGAAAGAGAAGCAAGAGGAGGGAGGCCTAACAGAACCACTGCTTCTGGTTATTGGAAAGCCACTGGTTCTCCTGGTTACGTTTACTCTTCTGACAACAAAGTGATTGGCCTTAAGAAAACGATGGTCTTTTACAGAGGAAAAGCTCCCACCGGAAGGAAAACCAAGTGGAAGATGCATGAATACAGAGCCATTCAACCCTCTACCTCTAACCAATCCTCCTCCTCCATTCCCACGTTGAGGCACGAATTCAGCTTGTGCAGAGTTTATGTGATATCGGGGAGCTTCAGGGCATTTGATCGGAGGCCAATGGAGGCGGGGTTTTCCGGCGACGGAGCTTCTGGTTCTGGTGCTGCAACTGGTGTTCACGGCGGAGCAAGCTCGTCGGACACTTCAAACTCAGGGGCAGAGCATGGAGAAGCAGGGGGGTCTAGTAGTACAAATCAGAATGTGAATGATGGGATTGTACAAGAGCCTCTATGGGAATGGGAGCAACTTAATTGGCTCTGA 726 0.5055 MAAPNYPGFRFYPTEEELVSFYLLNKLQGLRPDMDRVIPVVQIHDVEPWNLPQLAGEACRGDTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGYVYSSDNKVIGLKKTMVFYRGKAPTGRKTKWKMHEYRAIQPSTSNQSSSSIPTLRHEFSLCRVYVISGSFRAFDRRPMEAGFSGDGASGSGAATGVHGGASSSDTSNSGAEHGEAGGSSSTNQNVNDGIVQEPLWEWEQLNWL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0453 241 MobiDBLite consensus disorder prediction 180 228 - -
Mibi07g0453 241 ProSiteProfiles NAC domain profile. 5 164 IPR003441 GO:0003677|GO:0006355
Mibi07g0453 241 SUPERFAMILY NAC domain 6 162 IPR036093 GO:0003677|GO:0006355
Mibi07g0453 241 MobiDBLite consensus disorder prediction 193 227 - -
Mibi07g0453 241 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 183 - -
Mibi07g0453 241 Pfam No apical meristem (NAM) protein 7 135 IPR003441 GO:0003677|GO:0006355
Mibi07g0453 241 Gene3D NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0453 Mibi-ChrMibi07 5534451 5535761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0453 1 240 NAC Transcription Factor Family AT5G22380 59.756 3.20e-94 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi07g0453 NAM 9e-33 No_clan