Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0437 ATGCATGAACATATGATGCTCTTTGATCATGGATGCCGGCAAGATTTTACGATGGAGAAGAAGAGAAAACTAGAGGAACTTCCAGTTTCGCTGCCTCTCTCGCGTGCCGCCATCTGCTGGAGAAGATCTGAAGGGCCTAAGATAAAAGATGAGATGGACTATGTATCTCTATTTAAAAGTAATATAGTTGCAGTGTCCTCGTTGCTTCTTGGAATTGATGATAAGCTTTCGAGTGACGCTTTGAGGGAAGCAATCACAAGTATTAAGAAGGATTCTAGTGAGAAGAAACGTAATTTTGTGGAGACCATTGAACTCCAGGTTGGGCTGAAAAACTATGATCCTCAGAAGGATAAGCGTTTTAGTGGTTCTGTTAAGTTGCCCCACATTCCTCGCCCCAAGATGAAAATATGCATGCTGGGAGATGCTCAGCACGTCGAAGAGGCTGAGAAGATAGGGTTGGACTATATGGATGTGGAAGCGCTGAAGAAGCTGAACAAAAACAAGAAACTGGTTAAGAAACTTGCCAAAAAATACCATGCCTTTTTAGCTTCTGAAGCTGTTATTAAGCAGATTCCCCGTCTTTTGGGTCCTGGTCTCAACAAGGCAGGAAAATTCCCCACACTTGTCACTCACCAAGAATCTCTCGAGTCTAAGGTTAATGAGACCAAGGCCATGGTGAAGTTTCAGCTAAAGAAGGTGCTCTGCATGGGAGTTGCTGTGGGGAATGTTAGCATGGAGGAAAAACAAATCTTTCAAAATGTACAAATGAGCGTCAACTTCCTTGTTTCCTTGTTGAAGAAGAACTGGCAGAATGTTAGGTGCTTGTATCTCAAGAGCACGATGGGGAGATCATATCGTGTCTTTTAA 867 0.4302 MHEHMMLFDHGCRQDFTMEKKRKLEELPVSLPLSRAAICWRRSEGPKIKDEMDYVSLFKSNIVAVSSLLLGIDDKLSSDALREAITSIKKDSSEKKRNFVETIELQVGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGRSYRVF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0437 288 CDD Ribosomal_L1 81 287 IPR028364 -
Mibi07g0437 288 Pfam Ribosomal protein L1p/L10e family 95 282 IPR028364 -
Mibi07g0437 288 FunFam Ribosomal protein 209 286 - -
Mibi07g0437 288 FunFam Ribosomal protein 137 226 - -
Mibi07g0437 288 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 83 282 - -
Mibi07g0437 288 Gene3D - 137 226 IPR016095 -
Mibi07g0437 288 ProSitePatterns Ribosomal protein L1 signature. 188 207 IPR023673 -
Mibi07g0437 288 SUPERFAMILY Ribosomal protein L1 75 288 IPR023674 -
Mibi07g0437 288 Gene3D - 92 282 - -
Mibi07g0437 288 FunFam Ribosomal protein L10a 73 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0437 Mibi-ChrMibi07 5420590 5423461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0437 74 288 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 89.302 8.24e-128 360