Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0435 ATGTACCATCACCCCCAACACCAAGGAAAGAACATCCATTCTTCTTCTTCTTCCAGAATGCCAATATCAGCTGAGAGGCACATGTTCCTTCAAACTGGAAATGGCTCTGGTGATTCTGGGCTTGTCCTATCCACGGATGCTAAGCCCAGATTGAAATGGACAGCAGATCTGCACGCCAGGTTTATAGAAGCAGTCAATCAGCTAGGTGGAGCTGACAAGGCAACTCCTAAGACAGTAATGAAACTCATGGGGATTCCAGGGCTTACTTTGTATCATTTAAAGAGCCATCTTCAGAAGTATAGATTGAGCAAGAATCTGCACGGACAAAGTAACAACGTGACACACAAAATCAGTGCAGCAACAGGAGAAAGACTTCCTGAAACAAGTGGAAATCATGTGAATAATTTAAGCCTCGCGCCACAGCCTAACAAAGATCTACACATAAGCGAGGCCCTGCAGATGCAGATTGAGGTGCAGAGAAGACTAAATGAACAACTTGAGGTACAGAGACACTTGCAGCTTCGCATAGAGGCCCAAGGGAAATACCTGCAGGCAGTGCTTGAGAAAGCTCAAGAAACACTTGGCAGACAAAATTTAGGGATGGTAGGACTTGAAGCAGCAAAAGTTCAACTCTCAGAGCTTGTATCCAAAGTATCCTCACAGTGTTTGAGTTCTGCCTTCACAGAACTGAAGGAATTACAAGGATTCTGCCCACAACAACAAACACAAAACAACCAGCCAAACGACTGCTCAATGGACAGCTGCCTCACATCATGTGATGGATCTCAAAAGGAACAAGAAATACAAAATCCAGAATTAATTGGCCTAAGATCCTTCAATGGCCGTACATTCATGGAACGAAAGGAAATCATTGAATCACCAATCCTGAGGAATTCTGAACTCAAGTGGTGCGATGAAGTGAAAAAGAACAGTACCTTTCTGAGAAATCCAAGCGATTTATCCATGAGCATTGGAATCGAACGAGAAACTGAAAATAACGGAAGCGGCATGTTTTCTGAGAGATTAATGATAGGGAGAGAATCAGACGGTGAATTCCAACACAGAAATGCAAGTAAGACAGAATCGATTAAACCAATGGAAGAAAAAGTTAATCAGGAGTATAGATTGCCTTACTTTTCAGCGTCGAGATTGGATCTGAACACTCGTGAAGAAAACGATGCTTCGATGAGCTGCAAACAACTGGATTTGAATGGATTCAGCTGGAGCTGA 1230 0.4309 MYHHPQHQGKNIHSSSSSRMPISAERHMFLQTGNGSGDSGLVLSTDAKPRLKWTADLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKISAATGERLPETSGNHVNNLSLAPQPNKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGMVGLEAAKVQLSELVSKVSSQCLSSAFTELKELQGFCPQQQTQNNQPNDCSMDSCLTSCDGSQKEQEIQNPELIGLRSFNGRTFMERKEIIESPILRNSELKWCDEVKKNSTFLRNPSDLSMSIGIERETENNGSGMFSERLMIGRESDGEFQHRNASKTESIKPMEEKVNQEYRLPYFSASRLDLNTREENDASMSCKQLDLNGFSWS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0435 409 Coils Coil 149 169 - -
Mibi07g0435 409 Pfam Myb-like DNA-binding domain 50 101 IPR001005 -
Mibi07g0435 409 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
Mibi07g0435 409 Gene3D - 47 105 - -
Mibi07g0435 409 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Mibi07g0435 409 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 105 IPR017930 -
Mibi07g0435 409 Pfam MYB-CC type transfactor, LHEQLE motif 147 193 IPR025756 -
Mibi07g0435 409 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 18 332 IPR044848 GO:0003700
Mibi07g0435 409 FunFam Myb family transcription factor 47 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0435 Mibi-ChrMibi07 5394503 5397146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0435 80 409 G2-like Transcription Factor Family AT3G04030 53.313 2.42e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi07g0435 Myb_DNA-binding 1.2e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0287 01 2830729 2833013 Mibi07g0435 07 5394503 5397146 CCT