Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0426 ATGGGTGTGAGAGATCAGTACTATAATGTACAGGACAGGAATAATCCCTACTTTCATCATGCTTCTCCAACTTTCATAGAATGGCTCAAACCTTTATCATCTTCTTCTTCTTATTCTTCTGATGGCACTTATCAAAACGAGGTCGTTCGGGAGACTATCCAGTTTTTGCCTCTATCAAAAGATATGGAAGAAGTTGGAGAGAATCATAAGGAGGTGTTTGGATCAGTGAAGCAAGAGAAGGTATTGCTGGAGCAAGTTGGGGTGGCTTTGCACATTGGGTTGCCTACAAATAATTACCCAGAAGATCATAGTGATTTGAAGAAGAAGATTTCTGATGTTAAAGAAGAAGATGAGGAGGAGGAAGAAGAAGATGATGAAGATGGAATGAGGATGATGAGGAGAAGCTTCCATGGATTTAGCCAAGAGAGAAGGTTCTGGATACCAACTCCTGCACAGATCCTAATTGGGCCGATGCAGTTTGCTTGCTCCATATGCAGCAAGACCTTCAATAGGTATAACAACATGCAGATGCATATGTGGGGACATGGGTCTGAATTTAGGAAAGGACCAGACTCACTTAGAGGAACACAACCAGCAGCAATGTTGAGGCTACCATGTTATTGTTGTGCTCATGGCTGCAAGAACAACATCAACCACCCAAGAGCTAAGCCATTAAAGGACTTCAGAACCCTACAGACCCATTACAAGAGAAAGCATGGCTCTAAGCCCTTCATGTGCAGAAAATGTGCCAAGACTTTTGCTGTGAAAGGGGATTGGAGGACTCATGAGAAGAACTGTGGCAAGTTATGGTATTGCACTTGTGGTTCAGATTTCAAGCACAAAAGGTCCCTTAAGGATCATATTAGGTCTTTTGGAAAAGGTCACAAACCTCATCCTTCTCTTGAAGGTTTTGAGAAGGACTCTGAAGAAGATGAAGTTATTACTAATACTCATCACACGTAA 963 0.4206 MGVRDQYYNVQDRNNPYFHHASPTFIEWLKPLSSSSSYSSDGTYQNEVVRETIQFLPLSKDMEEVGENHKEVFGSVKQEKVLLEQVGVALHIGLPTNNYPEDHSDLKKKISDVKEEDEEEEEEDDEDGMRMMRRSFHGFSQERRFWIPTPAQILIGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCAHGCKNNINHPRAKPLKDFRTLQTHYKRKHGSKPFMCRKCAKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHKPHPSLEGFEKDSEEDEVITNTHHT 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0426 320 ProSiteProfiles Zinc finger C2H2 type domain profile. 264 297 IPR013087 -
Mibi07g0426 320 MobiDBLite consensus disorder prediction 101 128 - -
Mibi07g0426 320 Gene3D Classic Zinc Finger 159 182 - -
Mibi07g0426 320 Coils Coil 103 123 - -
Mibi07g0426 320 PANTHER ZINC FINGER PROTEIN WIP2 22 312 IPR043584 GO:0003700|GO:0010468
Mibi07g0426 320 FunFam Zinc finger protein WIP2 213 295 - -
Mibi07g0426 320 Gene3D Classic Zinc Finger 202 291 - -
Mibi07g0426 320 MobiDBLite consensus disorder prediction 293 320 - -
Mibi07g0426 320 ProSitePatterns Zinc finger C2H2 type domain signature. 162 182 IPR013087 -
Mibi07g0426 320 SUPERFAMILY beta-beta-alpha zinc fingers 230 264 IPR036236 -
Mibi07g0426 320 SMART c2h2final6 244 264 IPR013087 -
Mibi07g0426 320 SMART c2h2final6 160 182 IPR013087 -
Mibi07g0426 320 SMART c2h2final6 207 239 IPR013087 -
Mibi07g0426 320 SUPERFAMILY beta-beta-alpha zinc fingers 156 183 IPR036236 -
Mibi07g0426 320 MobiDBLite consensus disorder prediction 289 320 - -
Mibi07g0426 320 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 187 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0426 Mibi-ChrMibi07 5269311 5272613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0426 22 309 C2H2 Transcription Factor Family AT1G08290 57.229 9.01e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi07g0426 None None None