Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0408 ATGGACAGTGAGAATGGATCATCATCATCTTCTCCATGGTCAACAAAAAACCCTAGTTCTGCTTCATCTCATCACAAGAGGAAAGCAGGAAGAAAGAAGTTTCAGGAGACAAGGCATCCTCTCTTTCGAGGTGTCCGGCGAAGGAACGGTGACCGGTGGGTTTGTGAAGTCCGAGAACCCAACAAGAAGTCAAGGATTTGGCTAGGCACTTACCCTACTCCAGAAATGGCTGCTAGGGCACATGATGTGGCTGCCCTAGCTCTCCGAGGCAACTCGGCCTCTCTCAATTTCCCTGACTCGGCTCGGCTCCTCCCGGCCGCCACGTCATCCTCCCCCAGTGACATCAGAGCAGCCGCGTGTAAAGCTGCCCTTGCTTTCAGACCGACCGCTACCACCTCCTCCTCATCATCATCAGAAGAAGATAATAAGGAATTATTAAAGGTCAATGAAGGAGGAGGTGGTGGTGGTGGTGATGGAGGTAGAAGGTCGTTCATGGATGAGGAGGCATTGTATAACATGCCTAGTCTGTTACATCATATGGCTGAGGGTTTGCTTCTTAGTCCTCCTCCTTTATTTTTGAGGGCCTTAGGTGTTGGTTTGGATGATGACGACTTTACTTTCCAATTTGACTTTACTTTGTGGCCCGATGACTCAAACTGA 660 0.4955 MDSENGSSSSSPWSTKNPSSASSHHKRKAGRKKFQETRHPLFRGVRRRNGDRWVCEVREPNKKSRIWLGTYPTPEMAARAHDVAALALRGNSASLNFPDSARLLPAATSSSPSDIRAAACKAALAFRPTATTSSSSSSEEDNKELLKVNEGGGGGGGDGGRRSFMDEEALYNMPSLLHHMAEGLLLSPPPLFLRALGVGLDDDDFTFQFDFTLWPDDSN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0408 219 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 214 IPR045277 GO:0003700
Mibi07g0408 219 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Mibi07g0408 219 FunFam Ethylene-responsive transcription factor 2 40 99 - -
Mibi07g0408 219 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Mibi07g0408 219 SUPERFAMILY DNA-binding domain 41 100 IPR016177 GO:0003677
Mibi07g0408 219 MobiDBLite consensus disorder prediction 129 162 - -
Mibi07g0408 219 MobiDBLite consensus disorder prediction 1 43 - -
Mibi07g0408 219 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Mibi07g0408 219 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Mibi07g0408 219 Gene3D AP2/ERF domain 41 99 IPR036955 GO:0003700|GO:0006355
Mibi07g0408 219 Pfam AP2 domain 40 90 IPR001471 GO:0003700|GO:0006355
Mibi07g0408 219 MobiDBLite consensus disorder prediction 1 20 - -
Mibi07g0408 219 CDD AP2 40 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0408 Mibi-ChrMibi07 4911288 4911947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0408 14 217 AP2-EREBP Transcription Factor Family AT5G51990 52.195 1.30e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi07g0408 AP2 4.9e-14 CL0081