Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0400 ATGCAGTCTCTCTCCTCTCACCCTTCCCATTCTCTCCACCACCTCTTCCTCACCAAACCCTCCCCGAATCGGGTTTCCCCAACCCAAACCCGATTCTCTGTAAACTGCGCTTATGGCTTCGATTCCCCCAATTTCCACTCCGGCGGCTTCGTCTCCTCTCGCTCCGACTGGCAAAGCTCCTGCGCTATCCTCTCCAGCAAGGTCGTCTCTCAGGAACAATCCCCCACCGCCGACCACGTCGCCGCCGTCAACGGCCACAAATCCGCCGTCACAGATCTCAACCTCGTCCCCATCGCCAACATTGAATCCAACGACCCTAACAACAAGTCGCTCCAGCCAAAACCTCTCACTATTTCCGATCTTGCCCCTGCTCCCATGCACGGCTCTCAGCTCCGTGTTGCCTACCAAGGCGTCCCCGGAGCTTACTCCGAAGCCGCCGCCGGTAAAGCCTATCCTAACTGTGAAGCCATTCCTTGCGACCAATTCGAGGTCGCTTTCCAAGCCGTACAGCTCTGGATCGCAGATCGAGCCGTTCTTCCTGTAGAAAATTCCCTCGGCGGTTCGATCCACCGGAATTACGATCTCCTCCTCCGTCACCAGCTTCACATAGTCGGTGAGGTTCAACTTCCTGTTCATCACTGCCTCCTCGCGTTGCCTGGAGTTCGGAAGGAGTTTCTCACGCGCGTGATCTCACATCCTCAAGCTCTCGCTCAGTGTGAACACTCGCTTACGAATCTCGGCCTCAACGTCGCGCGTGAGGCGGTTGATGATACTGCCGGCGCGGCGGAGTTCATCGCGAGTAACAATCAGCGCGATACGGCGGCGATCGCGAGTGCACGCGCCGCGGAGCTGTACGGATTGCAGGTTTTGGCGGATGGGATTCAGGATGATCCGAGTAATGTGACGAGATTCGTGATGCTGGCGCGTGAGCCGATAATTCCGCGTACGGACAGGCCGTTCAAGACGAGTATAGTGTTTGCTCATGATAAGGGGACGTCTGTGTTGTTCAAGGTGTTATCGGCGTTTGCGTTTAGGAATATTAGCTTGACGAAGATTGAGTCGAGGCCTCACAGGAGCCGTCCGATTAGGGTGGTGGATGATGAGAATGTGGGGACGGCGAAGCATTTTGAGTATATGTTCTATGTTGATTTTGAAGCTTCCATGGCGGAAGTTAGGGCTCAGAATGCTTTAGCTGAGGTTCAGGAGTTTACTTCCTTCTTGAGGGTTTTGGGGAGTTATCCTATGGATATGACCCCATGGAGCCCTTCTTCTTCTTCCTCTTGTCCCATGTAA 1293 0.5468 MQSLSSHPSHSLHHLFLTKPSPNRVSPTQTRFSVNCAYGFDSPNFHSGGFVSSRSDWQSSCAILSSKVVSQEQSPTADHVAAVNGHKSAVTDLNLVPIANIESNDPNNKSLQPKPLTISDLAPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVQLWIADRAVLPVENSLGGSIHRNYDLLLRHQLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQALAQCEHSLTNLGLNVAREAVDDTAGAAEFIASNNQRDTAAIASARAAELYGLQVLADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRSRPIRVVDDENVGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSSSSCPM 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0400 430 SUPERFAMILY Periplasmic binding protein-like II 132 315 - -
Mibi07g0400 430 FunFam Arogenate dehydratase 316 417 - -
Mibi07g0400 430 Pfam Prephenate dehydratase 133 311 IPR001086 GO:0004664|GO:0009094
Mibi07g0400 430 MobiDBLite consensus disorder prediction 1 28 - -
Mibi07g0400 430 ProSitePatterns Prephenate dehydratase signature 2. 349 356 IPR018528 GO:0004664|GO:0009094
Mibi07g0400 430 Gene3D - 316 417 - -
Mibi07g0400 430 ProSiteProfiles Prephenate dehydratase domain profile. 132 309 IPR001086 GO:0004664|GO:0009094
Mibi07g0400 430 Gene3D - 216 297 - -
Mibi07g0400 430 FunFam Arogenate dehydratase 215 297 - -
Mibi07g0400 430 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 37 423 - -
Mibi07g0400 430 Gene3D - 127 215 - -
Mibi07g0400 430 ProSiteProfiles ACT domain profile. 323 414 IPR002912 -
Mibi07g0400 430 CDD ACT_CM-PDT 321 414 - -
Mibi07g0400 430 FunFam Arogenate dehydratase 127 214 - -
Mibi07g0400 430 CDD PBP2_Ct-PDT_like 132 311 - -
Mibi07g0400 430 SUPERFAMILY ACT-like 304 416 IPR045865 -
Mibi07g0400 430 ProSitePatterns Prephenate dehydratase signature 1. 285 307 IPR018528 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0400 Mibi-ChrMibi07 4795739 4797031 Dispersed/Wgd