Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0387 ATGGCAGGTACGGCCGACTTTAACAGCCCCTCTTTCGCTTTCAGTGGCGCTGGATTGCAGAATTCCGCCGTCAGTGTGAATTCAGACCCGACCGTTGGGCAGAAGAGGAAGAGAGGAAGGCCTCGAAAGTATGATGCAAACCTCACGTCTCCGAAATCGGCGCCGTTAATCTCCCCTCCTTCTAAGCGAGGCAGAGGAAGGCCACGAGAAATGTATTCCTTGACCGCTGGAGGATCCTTTGTCCCTCACGTCTTGGTTGTAAACGCTGGACAGGATCTTTTGGAAAGTGTGGTATCCTTCTCTTCTAAAGGCCGATCTCTTTGCATACTCTCAGCTACTGGAACTTTATCCTTTGTCGAAATTCATGACTCTTTTGGTCGTCAACTTTTGAGTCAGGAGGGTTTCTTTGACATAATTTGTTTTCATGGATCGTACGGTGGCATCGGTGGTGATCAAAGTCAGAAAAGTCTCCAAATGAGGATATCATTAGCTCGACCTAACGGGACTGTTTTCGGAGGCAGTGTTGGGGGCAGGCTGATAGCAGCTGGCCCTATTCAAGTAATATTGGGCAGTTTTAAGCAAAACATTTTTACTGGTAGCATTAAAAAGCGACTATCTCTTGGATCTTCTGGTGCTGCCAATGAGCCTGGTGCTTCAGATTTGGCGAGGCTTTCCTTACAAGTTCCTAGATTGATAGAATCTGAACAGAGCTTTCCTTCACCAACATCTGGACTTATGCCGATGACATCTAATGGATTTCCTGATCATGTCACGCCTAGAACATCTAATGGATATTTAAACAATGGACTTATGCCGATGACATCTAATGGCTTTCCTGATCACATCACGCCTAGAACATCTAATGGATTTCCAAACAATGTCACTGCTGCAACAACTAATGGTAATGGGATACCAGATTTCTATTCTCTGGATCCAAGCATGTACTCTACCTCTATGAACGGTTCCAGCCTAGACAATCAGATCTTGCAGCCCTTCACAGATCCAATGACATTTGGAGATATTAATAATAATGTCTCATATGTGAGTGATGCTGCGTGA 1059 0.4523 MAGTADFNSPSFAFSGAGLQNSAVSVNSDPTVGQKRKRGRPRKYDANLTSPKSAPLISPPSKRGRGRPREMYSLTAGGSFVPHVLVVNAGQDLLESVVSFSSKGRSLCILSATGTLSFVEIHDSFGRQLLSQEGFFDIICFHGSYGGIGGDQSQKSLQMRISLARPNGTVFGGSVGGRLIAAGPIQVILGSFKQNIFTGSIKKRLSLGSSGAANEPGASDLARLSLQVPRLIESEQSFPSPTSGLMPMTSNGFPDHVTPRTSNGYLNNGLMPMTSNGFPDHITPRTSNGFPNNVTAATTNGNGIPDFYSLDPSMYSTSMNGSSLDNQILQPFTDPMTFGDINNNVSYVSDAA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0387 352 CDD DUF296 82 192 IPR005175 -
Mibi07g0387 352 Gene3D - 82 208 - -
Mibi07g0387 352 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 25 223 IPR039605 GO:0003680
Mibi07g0387 352 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 193 IPR005175 -
Mibi07g0387 352 ProSiteProfiles PPC domain profile profile. 77 213 IPR005175 -
Mibi07g0387 352 SMART AT_hook_2 62 74 IPR017956 GO:0003677
Mibi07g0387 352 SMART AT_hook_2 35 47 IPR017956 GO:0003677
Mibi07g0387 352 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 201 - -
Mibi07g0387 352 MobiDBLite consensus disorder prediction 22 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0387 Mibi-ChrMibi07 4694534 4696536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0387 35 209 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 37.156 4.56e-29 114