Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0385 ATGGAGGCCCCTGTCGTCAGATCGAGGGGTCGGCCGAGGAAACGGAGGAGAAAAGAGGATGAAAATAGTACAGATGATGGGAGATCGGTTCCCGATTTGAAAAAGCAAGTTGTTGGGATGAGAGTACCGATAGCACTGGTTGGAAGATATATATTTAAAGAGTTTAAGGGAAATGGGGTGTTTCTGGGGAAGGTTGTGTATTATGATTGTGGTTTATATAGAGTCCATTATGTGGATGGTGATTTTGAGGATTTAGATAGCAGTGAAATTCGTGGATTGCTTCTCAATGATTGTGATTTTGATGAGGATTTGATTAAAAAGAGGAATAAATTAGATCAAATGGTGTTGAAGTATAGTGCTAAGAAAACGGATGGTACGGAGAATAGTTCTGCTGAATCAAACAAAGATGTCATTGGGATTGAGGCCCCTGTGACAAGTGAAGTGCCTGGTGAGTCATTGACTGAACAAGATGAGGTAGGTGTTGAGGAGGATGCTCGTTCATCAAGTGAGGAAGGAGATTCTGCTTCTGATGTTGAGATACCTTCTCTGCCTCCTCCTCTGCAGTTACCACCGTCTTCAGCGACTATTGGGGTGCCTGAGCCATATGTCTCTCATCTTCTTGCAGTGTATGGATTTTTAAGGTCTTTCAGCATTCGCCTGTTTTTAAGTCCGTTTTCTTTGGATGAATTTGTTGGTTCTGTTAATTGCCAAGTTCCAAATACACTGTTTGATTCCATTCATGTTTCCCTGATGCGTGCATTGAGGCGGCACCTTGAAACTCTTTCATCTGAGGGCTCGGAGCATGCATCAAAATGCTTGAGGTGTAATGATTGGGGCTTGCTTGATGCATTGACTTGGCCTGTTTTTGTTATCCAATATCTAGCAATTTATGGATATGCAAAAGGACCTGAGTGGAAAGGATTTTATGATGAGATTTTTAATGGTGAATATTATTCATTACCTGTAAGTAGGAAGTTGATTATACTGCAAATTCTTTGTGACGATGTTTTGGAGTCTGAGGAAATGAAAGCTGAAATGGGTGTTCGTGAAGAATTTGAAGTTGGAATGGAGTATGATGCTCAAGATATCATTCCAGAAGAAAGTTGGCCTAGATTCCATCCAAGAAATTCTAAAATTGCTTGCATGGATAAAGAATCTAAGAAGTTTGTTGTTGACTCTAATGCTGTGAAGCCACCTGGTAACTCTGTTCTAAATTTCAGAGACACTAGAAGGACCGAGGATGCTGATGCTGACAGCAATGGAGATGAATGCTGTCTCTGTGGCATGGATGGGACCTTGCTTTGTTGTGATGGATGTCCATCCGCATATCACTCCAGGTGTATTGGTGTGATGAAAATGTTTATACCCGAAGGGCCATGGTATTGTCCAGAGTGCAAAGTTAATATGAATGGGTTAAGCATTGCACGGGGAACATCACTTAGAGGGGCTGAATTATTTGGAATGGATCTGTATGGACAACTCTTCATGGGTGCTTGTGACCACTTAGTGGTACTCACTGTCAACAGTGAACTTTGTCTCAGATATTACAACCAGAATGACATTTTAAAAGTTCTCCAAGTGCTTTACGCTTCAGTAGACCATAGGCCCCTATACGATGGAATTTGTATGGCTGTGTTACATTATTGGAGTATTCCAGAAAGTATCTTGCCTGTATCTGTTAGAACTGGAACAGATGCTAACAATTCATGTACAGAGGAAGATACTAAGTTCTCTAGTTTATCAACCACTCCTTTGGGCGAAAAAGAACATACAGCTGTTAATTTAGTGAAGGCAGAATACCCTGTAACCAATGGGACTGTAGTTCATGGTAATTATATGGTTCCATCTTACTCGTTGGTTACCACTACTAGAGAGGCCTGTGCTTTCGAAAGCAGCAATGACACTAGAACTAGGGAGTGCTTCACCATGAATACTATCTTTCCTAAGGAGACTAGAATGGAGTCTGTCATTTCTGGTGGTCCTGGTAGTCATCAGCGCAGTCTCTTTGATATGACCAACAGTCATGGACATGCAAATGGTACTCAGTCGCCTTTTACTCCATCCTTGCAACTTAAAGATGGCTACCAAGCTTGCTCTGTAAAGGTTGAATATAATTCAACTAAGGATTTTGTATACATGGGTTTTTCTTTTAAGCCTCAGTCTTACATTAATCACTATACACATGGGGATTTTGCTGCGTCTGCTGCTGCTAAATTGGCTATTATTTCTTCTGAGGATTCTAGGGCAGAGGGTCATGTCTCAGATAATATGAGGAAATTTACTGCTGAAAGCGCTTCTTTGCAAGCAAAAGCATTCTCAATGACGGTTTCACGCTTCTTTTGGCCAAGTACTGAGAAAAAGCTTGTTGAAGTTCCTAGAGAGAGGTGTGGCTGGTGCCTTTCTTGTAAAGCCTCAGCCTCAAGCAAGAGAGGATGCATGCTAAATCATGCTGCCCTTAGTGCAACCAAAAGTGCTATAAAAGTTTTAAGTGGTCTTTCTGCTGTTAGGAGTGGAGAGGGCATTCTTCCAAGCATGGCAACATACATCATATATTTGGAGGAAAGTTTACGTGGTTTAGTAGTTGGGCCTTTTCTAAATGCGAATTACAGAAGACAATGGCGTAGACGAGTTGAGCAGGCTAAAACATTTAAAGCTATAAAGCCTCTTTTGCTTGAACTTGAGGAAAACATTCGCATAATATCGTTTACTGGCGAGTGGGTTAAGCTGATGGATGATTGGTTGGTTGAATCTTCTAGTATTCAAGGTGCTGCAAATTCTGTTGGAACAATACAGGCACGTGCACCAAGTGGAAGGCGCTACAAGAAACAATCAGCTGTTGATGAAGTTTCAGCTGATGTTTCTAATGATAAAAATTTTGACTGGTGGCATGGTGGTAAATCCATGAAAATATTATTTCTAAAAGCCGTTTTGCCAAAATCTGTGGTCAGAAAAGCAGCTCGCCAAGGTGGGTCGAAGAAAATTTCTTGCATCTCCTATGCTGATGGAAGTGAAATCTCTAAAAGAAGTAGACAGATATTTTGGAGAGCTGCAGTACAAATGAGTAGGAATGCATCACAGCTTGCGCTCCAGGTCAGATACCTTGATTTTCATCTTAGATGGAGTGATCTGATTTGTCCTGAGCAAAATCTCCAGGATGGGAAAGGTCAAGAGACTGAAGCTTCTGCATTCAGAAATGCTAATATCTGTGATAAGAAAGAAGTTGGGGGAAAACTTTTATATGGAGTTGTTTTTAAGAATCAAAAGCATCTTCCTTCTCGTATAATGAAAAGCATTGTTGAAGTAGAGCAGGGTCAAGAAGGAAAGGAAAAGTATTGGTTTTCTGAAGCACGTGTTCCTTTATATTTGGTAAAAGAGTATGAAGAAGGTACAGAAAAAATGCCATCTCATCAAGACAATGTGAAGTTGGAATCTCAGCTGCATCGAAGGCGGTTGAAAGCTGCTTGCAAGGATATATTTTTTTACCTTACCTGCAAGAGAGACAACTGGGATATATTCTCATGTGCTGCATGTCAGATGGATGCTTTAGCGGGGAATGCTTTCAAGTGTAACATATGCCAAGGTTATTGCCATAAGGGCTGTTTAAGTCCAACATTCTCCACATGCAATCGCTGTTATGCCAAATTGCTTGCTCAAAAGAAGACCACTGACGAATCTCCAACCAGCCCATTGCTCTTGCAAGGACAAGGGCACAGCTCTGTGCCTGTTTTGAAGGGGTCAAGACCTAAATGTTATGATCAAGCCATGAAATCTACCGGTATCAAGGAAACTCGTCCTGACTTGAATCAAGGTGCTCCTGAATCTGCTCAGGCATCAAAAAGCCGTCGCAAGACTTGGGGTATTATTTGGAATAAGAGGAGTGGTGAGGATACAGGCATTGATTTTAGGCTTAAAAATATACTTCTAAAGGGAGGCTTAGGGGCACATCAATTACCGCCTGTTTGTCACTTGTGTCGTAAGCCATACAGGTCTGATCTGATGTATGTCTGCTGTGAGACATGCAAAAATTGGTATCATGCTGATGCTCTTGAACTAGAAGAGTCAAAACTTTTTGAAGTGTCGGGTTTCAAATGCTGCAAGTGTCGCAGGATAAAATCTCCAGATTGTCCTTACTCTGATAAGAAACCCAGGACGCAGGAGGGCATTAAGAAACACCGGAGGCCTTCAAAGAAGGATAATTCTAGCACTGACAATTTTGGAGTTATTTCTGAACCAAAAGAGTCTGAGCCTGCTACCCCTAACTTCCTGATAAGAGATGGTGGATTGAGACAAGACAGCGACCCTCTGCTTTACTCTCTTTCAAGTGCCGGGCTGATAACAGACCCTAATGCAGAAGTGGATGTCAAGGGGAATGCTGTCTCTGGTCTGGGCCTTGGAAAACTTCCAGTGAGAAGACAGGTTAATAAGCGGGAGGGGGATGGTGATGAATCCTTTACAACTAGACTTTCACATGTTCCATTTTTTACGCAAAATGGATCAGGTAGTCTGTCAGCTTTGGAGAAGGAATTATCTCCTGTGGAATATGACCCTTCTGTTTGCCTAGATAGTAATATGCTGAATGACTGTGGAAATGAAAATTATGAATTTATGGACTTCGAACCCCATACCTACTTCTCTGTAACAGAATTGCTGCAGCCAGATGATAATCAGTTTGAGGGTGCTGATGTATCCGGGGACTTCTCTGGATACTTGGAAAATGCTACAAATATGGAAGGCATTCCTCAAGAATCTGTAGATTTTAGTTTTGTTGATAAACAAGAACCTGCGGCTTATTTACCAGGCAGTGGTTATCATTGTTGCCAATGCTTGCAGATGGAACCAGCTCCTGATCTCTCTTGTGAGATTTGTGGGACTTGGATTCACAGCCAATGTTCACCCTGGGTTGAATCACCTTGGAGGTGTGGTAATTGTCGGGAATGGCAATAG 4944 0.4175 MEAPVVRSRGRPRKRRRKEDENSTDDGRSVPDLKKQVVGMRVPIALVGRYIFKEFKGNGVFLGKVVYYDCGLYRVHYVDGDFEDLDSSEIRGLLLNDCDFDEDLIKKRNKLDQMVLKYSAKKTDGTENSSAESNKDVIGIEAPVTSEVPGESLTEQDEVGVEEDARSSSEEGDSASDVEIPSLPPPLQLPPSSATIGVPEPYVSHLLAVYGFLRSFSIRLFLSPFSLDEFVGSVNCQVPNTLFDSIHVSLMRALRRHLETLSSEGSEHASKCLRCNDWGLLDALTWPVFVIQYLAIYGYAKGPEWKGFYDEIFNGEYYSLPVSRKLIILQILCDDVLESEEMKAEMGVREEFEVGMEYDAQDIIPEESWPRFHPRNSKIACMDKESKKFVVDSNAVKPPGNSVLNFRDTRRTEDADADSNGDECCLCGMDGTLLCCDGCPSAYHSRCIGVMKMFIPEGPWYCPECKVNMNGLSIARGTSLRGAELFGMDLYGQLFMGACDHLVVLTVNSELCLRYYNQNDILKVLQVLYASVDHRPLYDGICMAVLHYWSIPESILPVSVRTGTDANNSCTEEDTKFSSLSTTPLGEKEHTAVNLVKAEYPVTNGTVVHGNYMVPSYSLVTTTREACAFESSNDTRTRECFTMNTIFPKETRMESVISGGPGSHQRSLFDMTNSHGHANGTQSPFTPSLQLKDGYQACSVKVEYNSTKDFVYMGFSFKPQSYINHYTHGDFAASAAAKLAIISSEDSRAEGHVSDNMRKFTAESASLQAKAFSMTVSRFFWPSTEKKLVEVPRERCGWCLSCKASASSKRGCMLNHAALSATKSAIKVLSGLSAVRSGEGILPSMATYIIYLEESLRGLVVGPFLNANYRRQWRRRVEQAKTFKAIKPLLLELEENIRIISFTGEWVKLMDDWLVESSSIQGAANSVGTIQARAPSGRRYKKQSAVDEVSADVSNDKNFDWWHGGKSMKILFLKAVLPKSVVRKAARQGGSKKISCISYADGSEISKRSRQIFWRAAVQMSRNASQLALQVRYLDFHLRWSDLICPEQNLQDGKGQETEASAFRNANICDKKEVGGKLLYGVVFKNQKHLPSRIMKSIVEVEQGQEGKEKYWFSEARVPLYLVKEYEEGTEKMPSHQDNVKLESQLHRRRLKAACKDIFFYLTCKRDNWDIFSCAACQMDALAGNAFKCNICQGYCHKGCLSPTFSTCNRCYAKLLAQKKTTDESPTSPLLLQGQGHSSVPVLKGSRPKCYDQAMKSTGIKETRPDLNQGAPESAQASKSRRKTWGIIWNKRSGEDTGIDFRLKNILLKGGLGAHQLPPVCHLCRKPYRSDLMYVCCETCKNWYHADALELEESKLFEVSGFKCCKCRRIKSPDCPYSDKKPRTQEGIKKHRRPSKKDNSSTDNFGVISEPKESEPATPNFLIRDGGLRQDSDPLLYSLSSAGLITDPNAEVDVKGNAVSGLGLGKLPVRRQVNKREGDGDESFTTRLSHVPFFTQNGSGSLSALEKELSPVEYDPSVCLDSNMLNDCGNENYEFMDFEPHTYFSVTELLQPDDNQFEGADVSGDFSGYLENATNMEGIPQESVDFSFVDKQEPAAYLPGSGYHCCQCLQMEPAPDLSCEICGTWIHSQCSPWVESPWRCGNCREWQ 1647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0385 1647 ProSitePatterns Zinc finger PHD-type signature. 424 465 IPR019786 -
Mibi07g0385 1647 MobiDBLite consensus disorder prediction 1377 1399 - -
Mibi07g0385 1647 SMART testlast3 200 260 IPR018501 -
Mibi07g0385 1647 MobiDBLite consensus disorder prediction 15 31 - -
Mibi07g0385 1647 ProSiteProfiles DDT domain profile. 200 260 IPR018501 -
Mibi07g0385 1647 SUPERFAMILY FYVE/PHD zinc finger 395 467 IPR011011 -
Mibi07g0385 1647 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1311 1385 IPR013083 -
Mibi07g0385 1647 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 408 481 IPR013083 -
Mibi07g0385 1647 SUPERFAMILY FYVE/PHD zinc finger 1319 1373 IPR011011 -
Mibi07g0385 1647 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 304 345 IPR028942 -
Mibi07g0385 1647 PANTHER PHD FINGER FAMILY PROTEIN 42 1416 - -
Mibi07g0385 1647 SMART PHD_3 423 466 IPR001965 -
Mibi07g0385 1647 SMART PHD_3 1173 1212 IPR001965 -
Mibi07g0385 1647 SMART PHD_3 1320 1368 IPR001965 -
Mibi07g0385 1647 MobiDBLite consensus disorder prediction 1377 1425 - -
Mibi07g0385 1647 MobiDBLite consensus disorder prediction 159 173 - -
Mibi07g0385 1647 MobiDBLite consensus disorder prediction 147 188 - -
Mibi07g0385 1647 CDD PHD_SF 1320 1367 - -
Mibi07g0385 1647 Pfam PHD-finger 424 467 IPR019787 -
Mibi07g0385 1647 ProSiteProfiles Zinc finger PHD-type profile. 421 468 IPR019787 -
Mibi07g0385 1647 MobiDBLite consensus disorder prediction 1 31 - -
Mibi07g0385 1647 Pfam DDT domain 203 257 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0385 Mibi-ChrMibi07 4652803 4659494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0385 290 565 EF-hand Containing Proteins AT5G22760 45.423 2.78e-67 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mibi07g0385 DDT 6.1e-13 No_clan