Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0379 ATGGCTGAGGATCGGAACGGAGACAGCAACGAGGTAAGTGATTATAGTTCGGAGGACGAAGGGACCGAGGATTACAGACGAGGAGGTTATCACGCCGTTCAAATTGGTGATACTTTCAAAAATGGATGCTATGTGGTTCAAAGCAAACTTGGTTGGGGTCATTTTTCTACTGTTTGGCTCGCTTGGGATACCCAGAAATCGCGTTATGTAGCCCTGAAGATTCAAAAGAGTGCACAGCACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAGATTGCTGAAGGGGACCTGGATGATAAGAAATGTGTGGTCAAGCTTTTGGATCACTTTAAGCATTCAGGACCTAATGGCCAGCATGTGTGTTTGGTTTTTGAGTTCTTGGGTGACAATCTTCTGACCCTTATAAAGTATAGTGATTACCGAGGGATTCCTATCTCGATGGTTAAAGAAATTTGTTTCCACATTCTGGTGGGATTGGATTATTTGCATCGCGAGCTGACTATAATACATACAGATTTGAAGCCAGAGAATGTCTTGCTTTTGTCAATGTTAGATCCATCCAAAGATCCTAGAAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAGGACAAGACCATTTCGAAAAATAGCGCCACGAAAGAGAGCAATAGTTCAAAAGGGGATCTTACCAGAAACCAGAAAAAGAAATTACGGAAAAAGGCTAAAAAGGCTGCTCAAAGTTGTGTTGAGAAGGAGAGTCCCGAGGAAGATGAGGAGGATTCTAAACCGCTTGAAGTAAAGGATTGTGGTGATGATGTGGAACAGATTGTGGAATCTGTTGAAGATAAACCTAGTAGTCCTGTAGCCAAAGATGAATCAATTGAAGTTGTTGAAACCAAGGACATCCCAAATGGTAGTCATGGTCAACTGAGAGTTAGTCGTTCCATGAAAAAGAAGTTGCTTGCTGCTGTTGATCTTAAATGCAAGCTAGTTGATTTTGGAAATGCTTGTTGGACTTATAAACAATTCACGAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTCTCGGATGCAAATATTCAACTCCAGCTGATTTATGGTCTCTTGCTTGCATTTGCTTTGAGCTTTCGACTGGTGATGTTCTTTTTGATCCGCACAGTGGTGACAACTATTCAAGGGATGAGGATCATGTGGCATTGATGATGGAACTTCTTGGAACGATGCCCCGCAAGGTTGCTCTAGGCGGACGCTATTCTCGAGAGTTTTTTAATAGAACTGGGGATTTAAGGCACATCCGCCGGTTGCGCTTCTGGCCTCTTAATAAGGTGCTGCTGGAGAAGTATGATTTTCGTGAGCAAGATGCCAATGACATGGCTGACTTCCTCGGTCCCATGCTTAATTTTGCCCCCGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAATCATCCATGGATCTCCGCAGGTCCTCGGACTCTTGAGCCCTCAGTGACTAATGTCCAATCTGAGGCCACAGACAAGGGAATGTCTGAAAAGATGAAGGAAAAGCTTGAGTTGGAGGCAGTTGAAGTTGGTGTGCGGAATATAACCATTGATGGATCTCCAAAGGCAATCAAAGAATCACAGGCTACATAA 1632 0.4338 MAEDRNGDSNEVSDYSSEDEGTEDYRRGGYHAVQIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTQKSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDLDDKKCVVKLLDHFKHSGPNGQHVCLVFEFLGDNLLTLIKYSDYRGIPISMVKEICFHILVGLDYLHRELTIIHTDLKPENVLLLSMLDPSKDPRKSGAPLILPNTKDKTISKNSATKESNSSKGDLTRNQKKKLRKKAKKAAQSCVEKESPEEDEEDSKPLEVKDCGDDVEQIVESVEDKPSSPVAKDESIEVVETKDIPNGSHGQLRVSRSMKKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGCKYSTPADLWSLACICFELSTGDVLFDPHSGDNYSRDEDHVALMMELLGTMPRKVALGGRYSREFFNRTGDLRHIRRLRFWPLNKVLLEKYDFREQDANDMADFLGPMLNFAPEKRPTAAQCLNHPWISAGPRTLEPSVTNVQSEATDKGMSEKMKEKLELEAVEVGVRNITIDGSPKAIKESQAT 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0379 543 MobiDBLite consensus disorder prediction 194 265 - -
Mibi07g0379 543 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0379 543 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0379 543 SUPERFAMILY Protein kinase-like (PK-like) 39 493 IPR011009 -
Mibi07g0379 543 CDD STKc_SRPK 33 485 - -
Mibi07g0379 543 MobiDBLite consensus disorder prediction 206 223 - -
Mibi07g0379 543 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 11 502 - -
Mibi07g0379 543 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Mibi07g0379 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Mibi07g0379 543 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Mibi07g0379 543 FunFam Serine/threonine-protein kinase SRPK-like protein 315 485 - -
Mibi07g0379 543 Gene3D Transferase(Phosphotransferase) domain 1 127 486 - -
Mibi07g0379 543 MobiDBLite consensus disorder prediction 1 24 - -
Mibi07g0379 543 FunFam CMGC/SRPK protein kinase 30 129 - -
Mibi07g0379 543 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g0379 543 Pfam Protein kinase domain 321 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0379 Mibi-ChrMibi07 4614907 4618146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0379 1 535 EF-hand Containing Proteins AT5G22840 67.159 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Mibi07g0379 Pkinase 1.1e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0237 01 2308989 2311750 Mibi07g0379 07 4614907 4618146 CCT