Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0367 ATGGAACTTTACAACCGTAGACTCCTCCTCATTAACGAACACGAACCTTCACCACTTTCAACTTCGCTCTTCGTAACACCTCTGAAATTAACATCCCCTGTACCCTTCAATTCTGATGTTGCTTATGTTATCATCATCATCCTCCTCTTAATAGCTTTCTTTGTTCTGTTTCTCCGGCGATATTCCCACCACTCGCCGTCGCCGGGGTCTTCAAATCATCATTCTCCGTCGTCATCTTGCGGCGGCGGCGGCCTGGACCCCACCACCGTACAATCCTTGCCGGTGTTTCCGTACAACCCAGAAGCAAAGAACATGGATGACTGTCCAATTTGCTTAACTGAATTTGAGACAGGTGAGACCGTTAAGATGGTACCTAACTGTGAGCACGTGTTCCACCGGGAGTGTATTGACACGTGGCTGTCGTCGCACGTGACGTGCCCAGTTTGCCGGGGGAGCGAGTTTTTTGCGGTGGACCGGCCGGAGGCGGAGTCAGATAAGGTGGCGTTGACTGGTCAACGGGTGGCATCCACGGTGGAGGATGGTGCCACGTGTCATCAGAGAAGGAGCTGGAGTTGTTCGAGCTTTGATAGAGATACAGTGGTTTTGAGAAGAACATTAAGCTACTGA 627 0.5088 MELYNRRLLLINEHEPSPLSTSLFVTPLKLTSPVPFNSDVAYVIIIILLLIAFFVLFLRRYSHHSPSPGSSNHHSPSSSCGGGGLDPTTVQSLPVFPYNPEAKNMDDCPICLTEFETGETVKMVPNCEHVFHRECIDTWLSSHVTCPVCRGSEFFAVDRPEAESDKVALTGQRVASTVEDGATCHQRRSWSCSSFDRDTVVLRRTLSY 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0367 208 CDD RING-H2_EL5_like 107 150 - -
Mibi07g0367 208 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 21 150 - -
Mibi07g0367 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 153 IPR013083 -
Mibi07g0367 208 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Mibi07g0367 208 SUPERFAMILY RING/U-box 89 156 - -
Mibi07g0367 208 Pfam Ring finger domain 106 150 IPR001841 -
Mibi07g0367 208 FunFam E3 ubiquitin-protein ligase ATL6 74 154 - -
Mibi07g0367 208 SMART ring_2 108 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0367 Mibi-ChrMibi07 4501532 4502158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0367 42 207 C3H Transcription Factor Family AT2G27940 36.216 2.61e-28 104