Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0366 ATGGCTATTGTTGGTGTGCACAGTGTGTCAGTGCTTGACTCTTCTTTCCTTAGGGACTCTCATTCTCAATCATCAACCAAGCATGGAGATGGAAGCACCACCCAATCATCTTCACTTCTGCAACTATGGCAACAGATTGAGGATGAAGAGCATCATCATCACAAGGAGTTAAACAATTCTAGTTGTGAAAACTCTTCTGATCTTGGAGATCTTGAAAGGGAAAGAGTAAGAAAAATTTTCAGAGAATGGATGAACAGTAATACTGGGGATAGAGATCATGAACCATCCACTATTTCCGTCAGAAATAACAGTCCTAAGGAAGAGTGGCTTGCCGAAACAGAACAAGAGAGGGTGAGAATTATAAGAGAGTGGGTACAAATGAGTAGCCAACACAGTGGAGATGAGCAATCTGCAGAAATTGAACGTGTTCGTAATGGATTTGTGATGAATAAAAATGAAGGACAAAGTGAGCAAACTCGTAGAGGGATTAGAAAATTATGTGGCAGACAGGTTTTGCTTGATATGTTAAACAAGGCTGAGAGAGAAAGGCAGAGAGAAGTTCAGGAATTGTTAGACCATCATGTTGTGTCTAATTTTCCCCATCGCAATCGGATTCAGGCATTGCTGAGAGGCAGGTTTCTGAGAAATGATAGTGTTGCTGATAAGAAAAGGACTACTTCTGTGTCGGACAGTGAATTAGGCTTATTGAGGCAAAAGCAGACTGTTTCTGGTTTAAGGGAAGGATTCTTCTCAAGAAAGAACATGTCTGGTTGTTGCAGTATAGAAAGCAACAATTTACCTGATACCTCATCAAACAGTGATATGGATGAAGCCAGCAGCTCACACAGTTCCCCAAATTTATACTCCAAACAATTTGAGCCCAATTATGAAGGAACTGAAGTAATAACTCAGATATCAGGTGATCAGATTTGCCTGCAGGGACCTACAACACATGAGAAATTTGAATGGCAAGAATCTCCTATTCATGTTGAAACAGAAAAACCACAGGATTTGAAAATTGAATCAAGAGATGTAGAGTCATCAATCAATAATGTTGGGAAAGAAAGAACAAATGATTCTGCACAAAGTGTTAATGTGGTATCAACCGAAGAAGACATGTCTAAGGAACTTTCCCAACCATGCTTTTCAATTGAAGAAACAAATCATTTCTCTGTTCAGGTATTCAGTGAGGAAGACTATAACGAACAGTCTAATCATGAATATTACTCAGAGGGAAATATCATTGATGAAGATAATTTGAATGAACCTGTTGCTCTAGAAGGAGATCTTCCCTTTGATTTTGGAAATGATGGAAGTGAAAGTCTTCCACTTGATGTAGAACAGAGAGACAACACTGAGGAAAGTTTGGATCTTGATCAACACATGTTGGAGAATCAAGATGGCGAAGACCCTCATGTTCAGGATGATGTTTCTGATCATGAAGGTGCTGCTACAGTTGGCGGAACTCAAGTGATTTATTTTTCTGATGATGACAATGCACATAGCGGAGAACTCAATGAACTGTTAAACAGGAGACGTGTTTCTAATCTGCTTAGTAGTAGTTTTCGGGAGAATCTGGATCAGTTGGTACTATCATATGTTGAAAGACAGAATCATGCTCAAATGGAGTGGGAGATACAAGAGGAAGAAGACGACATGGAGGAACATGCTATACGACAGAATCATGATCAGAATGGTGAAGTAGGTCCTTCTGAAAGCCCCACTTACTTGCCCTCTTCACCAACTCAATCTTCTCGACCTTTTTCTGACCAACACAATGACATGAATAATCAACATACTGGAATTGAGTGGGAGATTATTAATGGTTTGAGGGTTGACGTGGATGTGCTCCAGCAAAGGATGAATGAAATGCAGAGAATGCTTGAAGCTTGCATGGATATGCAGCTTGAGCTGCAACGCTCATTGAAGCAAGAAGTTTCTGCAGCACTACTTAATTGCTCAGATAATGTGCGAACAAGACTACAAGACCATGATCCCCAAGATGATGATAACTCAAACTGGGAGTGTGTGAGGAAAGGACTCTGCTGTATATGCCATGATAGCCATATTGATTCTCTGTTGTACAGATGTGGGCACATGTGTATGTGTTCAAAATGTGCAAATGAACTGTTACAGAGCAAGAGAAAGTGCCCAATGTGCCATGCACCTGTGGTGGAAGTGATACATGCTTATTCCATACACTAA 2205 0.4027 MAIVGVHSVSVLDSSFLRDSHSQSSTKHGDGSTTQSSSLLQLWQQIEDEEHHHHKELNNSSCENSSDLGDLERERVRKIFREWMNSNTGDRDHEPSTISVRNNSPKEEWLAETEQERVRIIREWVQMSSQHSGDEQSAEIERVRNGFVMNKNEGQSEQTRRGIRKLCGRQVLLDMLNKAERERQREVQELLDHHVVSNFPHRNRIQALLRGRFLRNDSVADKKRTTSVSDSELGLLRQKQTVSGLREGFFSRKNMSGCCSIESNNLPDTSSNSDMDEASSSHSSPNLYSKQFEPNYEGTEVITQISGDQICLQGPTTHEKFEWQESPIHVETEKPQDLKIESRDVESSINNVGKERTNDSAQSVNVVSTEEDMSKELSQPCFSIEETNHFSVQVFSEEDYNEQSNHEYYSEGNIIDEDNLNEPVALEGDLPFDFGNDGSESLPLDVEQRDNTEESLDLDQHMLENQDGEDPHVQDDVSDHEGAATVGGTQVIYFSDDDNAHSGELNELLNRRRVSNLLSSSFRENLDQLVLSYVERQNHAQMEWEIQEEEDDMEEHAIRQNHDQNGEVGPSESPTYLPSSPTQSSRPFSDQHNDMNNQHTGIEWEIINGLRVDVDVLQQRMNEMQRMLEACMDMQLELQRSLKQEVSAALLNCSDNVRTRLQDHDPQDDDNSNWECVRKGLCCICHDSHIDSLLYRCGHMCMCSKCANELLQSKRKCPMCHAPVVEVIHAYSIH 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0366 734 ProSiteProfiles Zinc finger RING-type profile. 682 721 IPR001841 -
Mibi07g0366 734 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 733 - -
Mibi07g0366 734 SUPERFAMILY RING/U-box 681 727 - -
Mibi07g0366 734 MobiDBLite consensus disorder prediction 564 596 - -
Mibi07g0366 734 MobiDBLite consensus disorder prediction 17 38 - -
Mibi07g0366 734 MobiDBLite consensus disorder prediction 430 453 - -
Mibi07g0366 734 Pfam Zinc finger, C3HC4 type (RING finger) 679 726 - -
Mibi07g0366 734 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 658 732 IPR013083 -
Mibi07g0366 734 Coils Coil 607 634 - -
Mibi07g0366 734 MobiDBLite consensus disorder prediction 261 288 - -
Mibi07g0366 734 Coils Coil 169 189 - -
Mibi07g0366 734 Coils Coil 539 559 - -
Mibi07g0366 734 CDD mRING-HC-C3HC5_NEU1 682 720 - -
Mibi07g0366 734 MobiDBLite consensus disorder prediction 563 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0366 Mibi-ChrMibi07 4497353 4501293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0366 668 728 C3H Transcription Factor Family AT3G06140 39.344 4.05e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0222 01 2160254 2164163 Mibi07g0366 07 4497353 4501293 CCT
Mibi07g0366 07 4497353 4501293 Mibi07g0366 07 4497353 4501293 ECH