Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi07g0366 | ATGGCTATTGTTGGTGTGCACAGTGTGTCAGTGCTTGACTCTTCTTTCCTTAGGGACTCTCATTCTCAATCATCAACCAAGCATGGAGATGGAAGCACCACCCAATCATCTTCACTTCTGCAACTATGGCAACAGATTGAGGATGAAGAGCATCATCATCACAAGGAGTTAAACAATTCTAGTTGTGAAAACTCTTCTGATCTTGGAGATCTTGAAAGGGAAAGAGTAAGAAAAATTTTCAGAGAATGGATGAACAGTAATACTGGGGATAGAGATCATGAACCATCCACTATTTCCGTCAGAAATAACAGTCCTAAGGAAGAGTGGCTTGCCGAAACAGAACAAGAGAGGGTGAGAATTATAAGAGAGTGGGTACAAATGAGTAGCCAACACAGTGGAGATGAGCAATCTGCAGAAATTGAACGTGTTCGTAATGGATTTGTGATGAATAAAAATGAAGGACAAAGTGAGCAAACTCGTAGAGGGATTAGAAAATTATGTGGCAGACAGGTTTTGCTTGATATGTTAAACAAGGCTGAGAGAGAAAGGCAGAGAGAAGTTCAGGAATTGTTAGACCATCATGTTGTGTCTAATTTTCCCCATCGCAATCGGATTCAGGCATTGCTGAGAGGCAGGTTTCTGAGAAATGATAGTGTTGCTGATAAGAAAAGGACTACTTCTGTGTCGGACAGTGAATTAGGCTTATTGAGGCAAAAGCAGACTGTTTCTGGTTTAAGGGAAGGATTCTTCTCAAGAAAGAACATGTCTGGTTGTTGCAGTATAGAAAGCAACAATTTACCTGATACCTCATCAAACAGTGATATGGATGAAGCCAGCAGCTCACACAGTTCCCCAAATTTATACTCCAAACAATTTGAGCCCAATTATGAAGGAACTGAAGTAATAACTCAGATATCAGGTGATCAGATTTGCCTGCAGGGACCTACAACACATGAGAAATTTGAATGGCAAGAATCTCCTATTCATGTTGAAACAGAAAAACCACAGGATTTGAAAATTGAATCAAGAGATGTAGAGTCATCAATCAATAATGTTGGGAAAGAAAGAACAAATGATTCTGCACAAAGTGTTAATGTGGTATCAACCGAAGAAGACATGTCTAAGGAACTTTCCCAACCATGCTTTTCAATTGAAGAAACAAATCATTTCTCTGTTCAGGTATTCAGTGAGGAAGACTATAACGAACAGTCTAATCATGAATATTACTCAGAGGGAAATATCATTGATGAAGATAATTTGAATGAACCTGTTGCTCTAGAAGGAGATCTTCCCTTTGATTTTGGAAATGATGGAAGTGAAAGTCTTCCACTTGATGTAGAACAGAGAGACAACACTGAGGAAAGTTTGGATCTTGATCAACACATGTTGGAGAATCAAGATGGCGAAGACCCTCATGTTCAGGATGATGTTTCTGATCATGAAGGTGCTGCTACAGTTGGCGGAACTCAAGTGATTTATTTTTCTGATGATGACAATGCACATAGCGGAGAACTCAATGAACTGTTAAACAGGAGACGTGTTTCTAATCTGCTTAGTAGTAGTTTTCGGGAGAATCTGGATCAGTTGGTACTATCATATGTTGAAAGACAGAATCATGCTCAAATGGAGTGGGAGATACAAGAGGAAGAAGACGACATGGAGGAACATGCTATACGACAGAATCATGATCAGAATGGTGAAGTAGGTCCTTCTGAAAGCCCCACTTACTTGCCCTCTTCACCAACTCAATCTTCTCGACCTTTTTCTGACCAACACAATGACATGAATAATCAACATACTGGAATTGAGTGGGAGATTATTAATGGTTTGAGGGTTGACGTGGATGTGCTCCAGCAAAGGATGAATGAAATGCAGAGAATGCTTGAAGCTTGCATGGATATGCAGCTTGAGCTGCAACGCTCATTGAAGCAAGAAGTTTCTGCAGCACTACTTAATTGCTCAGATAATGTGCGAACAAGACTACAAGACCATGATCCCCAAGATGATGATAACTCAAACTGGGAGTGTGTGAGGAAAGGACTCTGCTGTATATGCCATGATAGCCATATTGATTCTCTGTTGTACAGATGTGGGCACATGTGTATGTGTTCAAAATGTGCAAATGAACTGTTACAGAGCAAGAGAAAGTGCCCAATGTGCCATGCACCTGTGGTGGAAGTGATACATGCTTATTCCATACACTAA | 2205 | 0.4027 | MAIVGVHSVSVLDSSFLRDSHSQSSTKHGDGSTTQSSSLLQLWQQIEDEEHHHHKELNNSSCENSSDLGDLERERVRKIFREWMNSNTGDRDHEPSTISVRNNSPKEEWLAETEQERVRIIREWVQMSSQHSGDEQSAEIERVRNGFVMNKNEGQSEQTRRGIRKLCGRQVLLDMLNKAERERQREVQELLDHHVVSNFPHRNRIQALLRGRFLRNDSVADKKRTTSVSDSELGLLRQKQTVSGLREGFFSRKNMSGCCSIESNNLPDTSSNSDMDEASSSHSSPNLYSKQFEPNYEGTEVITQISGDQICLQGPTTHEKFEWQESPIHVETEKPQDLKIESRDVESSINNVGKERTNDSAQSVNVVSTEEDMSKELSQPCFSIEETNHFSVQVFSEEDYNEQSNHEYYSEGNIIDEDNLNEPVALEGDLPFDFGNDGSESLPLDVEQRDNTEESLDLDQHMLENQDGEDPHVQDDVSDHEGAATVGGTQVIYFSDDDNAHSGELNELLNRRRVSNLLSSSFRENLDQLVLSYVERQNHAQMEWEIQEEEDDMEEHAIRQNHDQNGEVGPSESPTYLPSSPTQSSRPFSDQHNDMNNQHTGIEWEIINGLRVDVDVLQQRMNEMQRMLEACMDMQLELQRSLKQEVSAALLNCSDNVRTRLQDHDPQDDDNSNWECVRKGLCCICHDSHIDSLLYRCGHMCMCSKCANELLQSKRKCPMCHAPVVEVIHAYSIH | 734 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi07g0366 | 734 | ProSiteProfiles | Zinc finger RING-type profile. | 682 | 721 | IPR001841 | - | |
Mibi07g0366 | 734 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 733 | - | - | |
Mibi07g0366 | 734 | SUPERFAMILY | RING/U-box | 681 | 727 | - | - | |
Mibi07g0366 | 734 | MobiDBLite | consensus disorder prediction | 564 | 596 | - | - | |
Mibi07g0366 | 734 | MobiDBLite | consensus disorder prediction | 17 | 38 | - | - | |
Mibi07g0366 | 734 | MobiDBLite | consensus disorder prediction | 430 | 453 | - | - | |
Mibi07g0366 | 734 | Pfam | Zinc finger, C3HC4 type (RING finger) | 679 | 726 | - | - | |
Mibi07g0366 | 734 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 658 | 732 | IPR013083 | - | |
Mibi07g0366 | 734 | Coils | Coil | 607 | 634 | - | - | |
Mibi07g0366 | 734 | MobiDBLite | consensus disorder prediction | 261 | 288 | - | - | |
Mibi07g0366 | 734 | Coils | Coil | 169 | 189 | - | - | |
Mibi07g0366 | 734 | Coils | Coil | 539 | 559 | - | - | |
Mibi07g0366 | 734 | CDD | mRING-HC-C3HC5_NEU1 | 682 | 720 | - | - | |
Mibi07g0366 | 734 | MobiDBLite | consensus disorder prediction | 563 | 596 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi07g0366 | Mibi-ChrMibi07 | 4497353 | 4501293 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi07g0366 | 668 | 728 | C3H Transcription Factor Family | AT3G06140 | 39.344 | 4.05e-07 | 50.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mibi01g0222 | 01 | 2160254 | 2164163 | Mibi07g0366 | 07 | 4497353 | 4501293 | CCT | |
Mibi07g0366 | 07 | 4497353 | 4501293 | Mibi07g0366 | 07 | 4497353 | 4501293 | ECH |