Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi07g0364 | ATGGCGAACGGTAAGGATTCCGACGAGTTCCTGGTGTTATCGAAGGTCCGTACAGGTCTCAAGAGGGAGTTTGCATTCGCCATGAAGGCTCAATCCGAGATCTGTGGTGGATCCCTGGGACGAACCCGTGCCAGCAAAAACAACAACAATGGGGTCCCACAAGATTCCCCCACCAACAAGAGGCCCAAGAAATCCTCTTCGTCTAGGGCTAACAAGAGAGACGAGCAGAATGATGTTGTTGAAGTTGAACCCATTGTTATGGAAGAGGTCAAGGGAGAAAAGGAGGAGAAGGTAAAGGCTGTGGAGGATAATATGGAGGTAGATGTTATGAGCGAGGAGGAGGCTAAAAGCGATGTGGTCGATTTATCAGGTGACGATGAACCCAAGAAATTAGTGAGGGAACAACCAGTGGATGATGAGGAGAACAAGAGTGATGACGTGGAAACTGTGAGCGATGGTGAGCCGAAGAGTGTTATTCCAATTTCAGAATCACTGAAGGGAGCAACAAATGAAGATGATTTACAGAAGCCTTCGATGACTGAGAACTTGAGTGGGGGAGAGATGTGTTCTTTAGATGAAAAGGTTGTTAATGTGACTCCTCCTAATGATGACACTAAGGTGAAGGAAATTATTGGGAGCCCACCTAGGCGGTTTACGAGGTCTGTTTTGAAGCAGCAGCAAGATGATTCGAAGCCTACAACTGATGGGAATGAAGCTTGTGATAGAGGTATTGAACTTGGTGATGCTATGAGGGAAAGTGTAGATGCTTCATTAATCACTACGCCAACCCAAACCAAAATGCTAACACAAACCAAAATGTCCAAGAGTAGATCCTCGAAGAAGTTCCCTTCGAAGCTGAAGGACCTTCTAGCCACTGGGATTCTTGAAGGGCTGCCTGTCAAGTATGTTCGAGGAGCTAAGGGACGAAGGCCTGGAGATTCAGGACTCCGAGGAGAGATTAGAGGCCCGGGGATTTTGTGCTATTGCGAAGATTGCAACGGGGTTGAGGTTTTATCACCCACCGTGTTTGAGCTGCATGCTGGTAGTTCAAACAAACGACCCCCAGAGTACATATACCTTGAGAATGGGAATACGCTTCGTGATGTCATGAATACATGTTCTAGTGTTGCATTGGATGCTTTGGATGAATCTGTACAGAAAATCCTTGGGGCATTCACCTTTAAGAACTCTGCTATCTGTTTGAATTGCAGAGTGGCCTTATCTCAAGCTGGCAAGGGATGCTCTAGACTGCTATGCGATACTTGTGTGGCCTTAAAAGAGTCTCAACCTAGCCCTGTTCAAATAGATGAGGCTAGCAATTCATGTTCTTTATCTGCAGTTGCCCTCAGGTCTCCAGAACCAGTTGTCATTCCATCGAAATTGAACAGCAGCGGGATGAAGCAGACAACTTCTCGGGGCAAGAGTCAAGGAAGAATAACCAAAAAGGATCTGCGATTGCATAAATTGGTCTTCGAGGAAGATGTGTTGCCAGATGGAACTGAAGTTGCCTACTATGCTCGTGGACAGAAACTCTTGGTGGGTTACAAAAAGGGGTTTGGAATTGTTTGTAGCTGCTGTAACACCGAGGTAAGCCCTTCGCAGTTTGAAGTTCATGCTGGTTGGGCATCACGACGCAAGCCTTATCTGCACATATACACATCCAATGGTGTCTCTCTCCATGAATTGTCCGTTTCTCTATCAAGAGGTCGGAGGTTTTCTACAAATGAAAATGATGATCTCTGCAGTATCTGCTCAGATGGAGGGAATCTTTTGTGTTGTGATGGATGTCCAAGGGCTTTTCACATAGACTGTGTTCCTCTGTCATGCATTCCAACTGGCACTTGGTATTGTAAATATTGCCAGAACGTGTTTCTGAAAGACAAATATGTGGAGCATAACATGAATGCGGTGGCAGCAGGAAGGATTGCTGGGGTTGATCCTTTAGAACAGATAAACCGAAGATGTATTCGCATTGTCAAAACTGTAGAGGTTGACCATGGTGGATGTGCATTATGCAGAAGCCATGATTTCAGCAAAAACTTTGGTCCTCGAACAGTGATTATATGTGATCAGTGTGAAAGGGAATATCATGTTGGCTGTTTGAAGGAGCATAATATGCAGAACTTAGAGGAATTACCTGAAGGAAATTGGTTCTGCTGCACTGATTGCAGTCGGATTCATTCTGCTCTCCTTAATTTGGTCTCTTGTGGGGCAGAGAATCTTCCGGATTCTCTATTAAGTATGTTACAGAAGAAGCATGAAGAAAAGGGCCTGGAAAATGGGAACGGTCTGGATATAAAATGGAGAATCTTAAATTGGAAACTGGCTGCTTCTGATGGAACTAGGCAGCTGCTTTCGAAGGCTGTTGCAATCTTCCATGAGCGGTTTGATCCAATAGTTGATTCATCTTCAGGTCGTGATTTCATTCCAACAATGCTTTATGGAAGGAACATAAGGGGTCAAGATTTTGGTGGGATGTATTGTGCTGTGCTAACTGTGAATGAAGTGGTTGTTTCTGCCGGCATATTTCGTATATTTGGGGCGGAGGTGGCAGAGCTTCCCTTAGTGGCAACAATTGCAGATTTTCAAGGAAAGGGCTACTTCCAGTGCCTGTTTGCTTGCATTGAGGGGCTGCTTGGATCTTTAAACGTGAAACAATTCGTCCTACCAGCCGCGGAAGAAGCGGAATCAATATGGACGAGTAAATTTGGTTTTACCAAGTTAGAACAAGAAGAGGTAAACAATTACAAGAGATTTTATCACATGATGATATTTCAAGGGACCTCAGTGCTGAGGAAGTCAGTTCCTGCACCACCAGAATTGTGCGTCAATGCGGTGTAA | 2841 | 0.4491 | MANGKDSDEFLVLSKVRTGLKREFAFAMKAQSEICGGSLGRTRASKNNNNGVPQDSPTNKRPKKSSSSRANKRDEQNDVVEVEPIVMEEVKGEKEEKVKAVEDNMEVDVMSEEEAKSDVVDLSGDDEPKKLVREQPVDDEENKSDDVETVSDGEPKSVIPISESLKGATNEDDLQKPSMTENLSGGEMCSLDEKVVNVTPPNDDTKVKEIIGSPPRRFTRSVLKQQQDDSKPTTDGNEACDRGIELGDAMRESVDASLITTPTQTKMLTQTKMSKSRSSKKFPSKLKDLLATGILEGLPVKYVRGAKGRRPGDSGLRGEIRGPGILCYCEDCNGVEVLSPTVFELHAGSSNKRPPEYIYLENGNTLRDVMNTCSSVALDALDESVQKILGAFTFKNSAICLNCRVALSQAGKGCSRLLCDTCVALKESQPSPVQIDEASNSCSLSAVALRSPEPVVIPSKLNSSGMKQTTSRGKSQGRITKKDLRLHKLVFEEDVLPDGTEVAYYARGQKLLVGYKKGFGIVCSCCNTEVSPSQFEVHAGWASRRKPYLHIYTSNGVSLHELSVSLSRGRRFSTNENDDLCSICSDGGNLLCCDGCPRAFHIDCVPLSCIPTGTWYCKYCQNVFLKDKYVEHNMNAVAAGRIAGVDPLEQINRRCIRIVKTVEVDHGGCALCRSHDFSKNFGPRTVIICDQCEREYHVGCLKEHNMQNLEELPEGNWFCCTDCSRIHSALLNLVSCGAENLPDSLLSMLQKKHEEKGLENGNGLDIKWRILNWKLAASDGTRQLLSKAVAIFHERFDPIVDSSSGRDFIPTMLYGRNIRGQDFGGMYCAVLTVNEVVVSAGIFRIFGAEVAELPLVATIADFQGKGYFQCLFACIEGLLGSLNVKQFVLPAAEEAESIWTSKFGFTKLEQEEVNNYKRFYHMMIFQGTSVLRKSVPAPPELCVNAV | 946 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi07g0364 | 946 | FunFam | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain | 665 | 726 | - | - | |
| Mibi07g0364 | 946 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 568 | 644 | IPR013083 | - | |
| Mibi07g0364 | 946 | ProSiteProfiles | Zinc finger PHD-type profile. | 578 | 623 | IPR019787 | - | |
| Mibi07g0364 | 946 | Pfam | Tify domain binding domain | 318 | 373 | IPR032308 | - | |
| Mibi07g0364 | 946 | Pfam | Tify domain binding domain | 514 | 563 | IPR032308 | - | |
| Mibi07g0364 | 946 | SMART | PHD_3 | 580 | 621 | IPR001965 | - | |
| Mibi07g0364 | 946 | SMART | PHD_3 | 668 | 724 | IPR001965 | - | |
| Mibi07g0364 | 946 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 663 | 726 | IPR013083 | - | |
| Mibi07g0364 | 946 | Gene3D | - | 766 | 933 | - | - | |
| Mibi07g0364 | 946 | SUPERFAMILY | FYVE/PHD zinc finger | 660 | 725 | IPR011011 | - | |
| Mibi07g0364 | 946 | FunFam | PHD finger family protein | 765 | 934 | - | - | |
| Mibi07g0364 | 946 | MobiDBLite | consensus disorder prediction | 37 | 179 | - | - | |
| Mibi07g0364 | 946 | ProSitePatterns | Zinc finger PHD-type signature. | 581 | 620 | IPR019786 | - | |
| Mibi07g0364 | 946 | MobiDBLite | consensus disorder prediction | 41 | 64 | - | - | |
| Mibi07g0364 | 946 | PANTHER | AUTOIMMUNE REGULATOR | 61 | 934 | - | - | |
| Mibi07g0364 | 946 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 824 | 924 | IPR016181 | - | |
| Mibi07g0364 | 946 | MobiDBLite | consensus disorder prediction | 219 | 233 | - | - | |
| Mibi07g0364 | 946 | MobiDBLite | consensus disorder prediction | 68 | 140 | - | - | |
| Mibi07g0364 | 946 | CDD | PHD1_AIRE | 580 | 620 | - | - | |
| Mibi07g0364 | 946 | MobiDBLite | consensus disorder prediction | 216 | 241 | - | - | |
| Mibi07g0364 | 946 | FunFam | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain | 567 | 644 | - | - | |
| Mibi07g0364 | 946 | SUPERFAMILY | FYVE/PHD zinc finger | 568 | 622 | IPR011011 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi07g0364 | Mibi-ChrMibi07 | 4465166 | 4470701 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi07g0364 | 283 | 935 | PHD Transcription Factor Family | AT2G36720 | 46.165 | 0.0 | 637 |