Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0359 ATGGAACCTCCATTCCCTCAATCCTCTGATTCCCCTTTTCACCATTTCGGCTGCAAACATTACAGTAGGAGGTGCAAGATCAGAGCACCCTGTTGCAATGAAATTTTTGACTGTCGCCATTGCCATAATGAAGCTAAGAACTCCGATGACATCAATCCCATGGATCGTCACGATATACCCCGCCACGACATTATGAAGGTCATCTGTTCATCATGTGAAACAGAACAAGATGTTCAACAGCATTGCATCAACTGTGGAATATGCATGGGGGAGTACTTTTGTGCTACTTGCAAATTCTTTGACGATGATATTTCGAAGAATCAATACCACTGTGATGAATGTGGCATCTGCAGAACTGGAGGCAAGGATAACTTTTTCCACTGCAAGAAATGTGGCTGTTGCTACTCCAATGTGATGAAAGAAGGACATCGATGCGTGGAAGGAGCAATGCATCATAATTGCCCTGTTTGTCTTGAGTATTTATTTGATACCTTGAGAGACATCACTGTTTTGCCTTGTGGCCATACCATACATTTGGAGTGTGTTCGAGAGATGGAGCGACATTACAGGTTTACATGCCCTGTTTGTTCAAAATCCACCTGCGACATGTCAAGTCTGTGGAAGAAGCTTGACAATCTGATCGCTTCGACACCAATGCCCGAAGCTTTCAAAGACAAGGTGGTTTGGATACTGTGCAATGATTGTGGAGTGAACTCACAAGTGAAGTTCCATGTCGTGGCTCATAAGTGTCAGAGTTGTAACTCATACAACACCAGACAGATACAGAGAATTCCAACCACCGCTTGCACTTCTTCGGTGGCTGAGGTGGTGAGATGA 837 0.4421 MEPPFPQSSDSPFHHFGCKHYSRRCKIRAPCCNEIFDCRHCHNEAKNSDDINPMDRHDIPRHDIMKVICSSCETEQDVQQHCINCGICMGEYFCATCKFFDDDISKNQYHCDECGICRTGGKDNFFHCKKCGCCYSNVMKEGHRCVEGAMHHNCPVCLEYLFDTLRDITVLPCGHTIHLECVREMERHYRFTCPVCSKSTCDMSSLWKKLDNLIASTPMPEAFKDKVVWILCNDCGVNSQVKFHVVAHKCQSCNSYNTRQIQRIPTTACTSSVAEVVR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0359 278 Pfam CHY zinc finger 18 99 IPR008913 GO:0008270
Mibi07g0359 278 Gene3D - 225 267 - -
Mibi07g0359 278 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 14 263 - -
Mibi07g0359 278 ProSiteProfiles Zinc finger RING-type profile. 154 197 IPR001841 -
Mibi07g0359 278 ProSiteProfiles Zinc finger CTCHY-type profile. 89 153 IPR017921 -
Mibi07g0359 278 Pfam Ring finger domain 153 196 IPR001841 -
Mibi07g0359 278 ProSiteProfiles Zinc finger CHY-type profile. 11 87 IPR008913 GO:0008270
Mibi07g0359 278 FunFam RING finger and CHY zinc finger domain-containing protein 1 225 268 - -
Mibi07g0359 278 Pfam Zinc-ribbon 201 259 IPR039512 -
Mibi07g0359 278 SUPERFAMILY CHY zinc finger-like 14 88 IPR037274 GO:0008270
Mibi07g0359 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 217 IPR013083 -
Mibi07g0359 278 SUPERFAMILY Zinc hairpin stack 90 147 IPR037275 -
Mibi07g0359 278 SMART ring_2 154 196 IPR001841 -
Mibi07g0359 278 SUPERFAMILY RING/U-box 152 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0359 Mibi-ChrMibi07 4438658 4441485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0359 6 272 C2H2 Transcription Factor Family AT3G18290 38.768 1.53e-53 185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g0359 07 4438658 4441485 Mibi07g0359 07 4438658 4441485 ECH