Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0346 ATGGGAAGAGCTCCATGCTGTGACAAAGCAAATGTGAAGAAAGGGCCATGGTCACCAGAAGAAGACACCAAGCTCAAAGATTACATAGAGAAGAACGGAACAGGAGGTAATTGGATCGCACTTCCTCAGAAAGCAGGTCTAAAAAGGTGTGGGAAAAGTTGCAGATTGAGGTGGCTCAACTATCTGAGGCCAAACATTAAGCATGGAGAGTTCTCTGATGAGGAAGATCGAATCATATGCACCCTCTATGCCAATATTGGAAGCAGGTGGTCAATAATAGCAGCTCAGTTACCAGGGAGGACAGACAATGATATTAAGAACTATTGGAACACCAAGCTGAAGAAGAAGCTAATGGGTTTGCTTCCTCCATCTTCTAATCATCATAATCAGATCAGGAAATTACCTTCAACATTATTTCATCAATCCTCTCATCTTCTTCATGATCATCAAATTCAAAACTCACCGTTTACTGCTACTTCTCATCAACAATCATCATACAAAGACTTTACTTCTTACTTGTACTCTAGCCCACCTTCATCAACCATATCCTTCACTGGCCTTCATGAGCCAACTACTTCTGCTATTATGCCTCCTTCTTCAACCACCAATATTTTTCCTTATTTTCAAAACCAAGATCAGACCTCCTTGGTCAATGGAGGTGGTCAAATGCAATACTACTACATGTTTGGGAGTGAGGGAAGTTGCAGCACTTCCTCAGATGGAAGTTGCAGTCAAATCAGCCTTGGAGGAGGAAGAGGAGATGTCAAACAAGAAGATATGGGTTTTCATCAATTCCATCAAAACTTCAACTTGTCCAATAGTAATGGTGGTGGGTTTGATCATCAGTTCAACAAGTTCATGCCCGGAGGTGAAACTAGCATTAACCAGTGGACATCAGAGAAGGCAACAAGTGGTGATGGAGGGTATTTTGGGCAAAACACATTAATGGATTATGGGATTGAGGAGATAAAGCAGATGATCAGTGGTGGTAATTATAATAATAGTAATGATAGTAATAATGTTGAGGGAAACAAGAGAGAGGAAGAGGAGAAGGGGATGAATATGATGTACTACTACTACTGA 1083 0.41 MGRAPCCDKANVKKGPWSPEEDTKLKDYIEKNGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICTLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLLPPSSNHHNQIRKLPSTLFHQSSHLLHDHQIQNSPFTATSHQQSSYKDFTSYLYSSPPSSTISFTGLHEPTTSAIMPPSSTTNIFPYFQNQDQTSLVNGGGQMQYYYMFGSEGSCSTSSDGSCSQISLGGGRGDVKQEDMGFHQFHQNFNLSNSNGGGFDHQFNKFMPGGETSINQWTSEKATSGDGGYFGQNTLMDYGIEEIKQMISGGNYNNSNDSNNVEGNKREEEEKGMNMMYYYY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0346 360 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mibi07g0346 360 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi07g0346 360 Gene3D - 7 68 - -
Mibi07g0346 360 CDD SANT 16 62 IPR001005 -
Mibi07g0346 360 SMART sant 13 64 IPR001005 -
Mibi07g0346 360 SMART sant 67 115 IPR001005 -
Mibi07g0346 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mibi07g0346 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mibi07g0346 360 FunFam Transcription factor RAX3 7 68 - -
Mibi07g0346 360 PANTHER OS09G0431300 PROTEIN 1 326 - -
Mibi07g0346 360 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mibi07g0346 360 CDD SANT 70 111 IPR001005 -
Mibi07g0346 360 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mibi07g0346 360 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mibi07g0346 360 FunFam Transcription factor RAX2 70 136 - -
Mibi07g0346 360 MobiDBLite consensus disorder prediction 329 348 - -
Mibi07g0346 360 Gene3D - 70 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0346 Mibi-ChrMibi07 4333297 4334904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0346 1 119 MYB Transcription Factor Family AT5G57620 90.756 5.32e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi07g0346 Myb_DNA-binding 1.6e-13 CL0123