Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0344 ATGATACGAGAGATTATCAGATTACGCAACTTCCGTGTAAAAATCATTTGGCGGAAAAAACAAAGTGAAGAAGAAGATAACAAAAAAACCATTCAAGCAACACCACTCTTCTTGTTTGTTCCATCCAGAAGAAAAACAACGATGCAGAGATCTGGTTATGGCCGTGACGGCATTTACAGGTCTCTCCGGCCACCTCCTTCAATACCCACTAACCAAAATCTCTCCCTCGTTTCATTTCTCTTCACAAATGTCTCTTCCTTCCCCACAAAACCTGCTTTGATTGACTCTGATACCTCCCAATCTCTCTCTTTCTCTCAGCTCAAATCCTTAGTAGTGAAAGCCTCACATGGCTTCCGAAACCTAGGAATCTCCAAAAACGACGTCGTTCTCCTTTTCTCCCCCAACACCATCCTCTACCCTATCTGCTTCCTCGCCGTCACCGCCATTGGCGCCGTCGTCTCCACCGCCAACCCCATCTACACCGTCGCCGAAATCTCCAAACAAATCAAAGATTCCAATCCCAAGCTCGTGATCACCGTTCCTGAACTTTGGGATAAAGTTAAGAATTTTAATCTACCCTCGTTGATTTTAGGTTCCCAAATCGATTCCTCTGTCTTGTCGGATTCAAAGATTACGACTTTTGATGGATTGCTTGGATTGGGTGGGTCCCACACAGAATTTCCGGCGAGTGATGTTAAGCAGAACGATACGGCGGCGCTTTTGTATTCTTCGGGGACTACTGGGGTTAGTAAGGGAGTGATTCTTACGCATAGGAATTTCATTGCTGCTGCTCTTATGATTGGTATGGATGATGAATTGGCTAATGAGAGACACGATGTTCTTCTTTGTGTTCTTCCGATGTTTCATATTTTTGGGCTTGCTGTTATTACCTATGCTCAGCTTCAGAGAGGTAATGCGGTGGTTTCTATGAGGAAATTTGAGTTTGAAATGATGGTAAAGGTGGTTGAAAAGTATAGTGTGACTCGTTTGTGGGTTGTGCCTCCGATTATACTTGCTCTGGCTAAGCAGAGTGTGGTTAAGAAGTATAATCTTTCTTCATTAAAGCATATTGGTTCTGGAGCTGCTCCTTTGGGGAAGGATTTGATGGAAGAGTGTGCTAAGAATTTCCCTCAAACTTTGGTTATGCAGGGCTATGGTATGACAGAAACTTGTGGCATTGTATCTGTGGAGAATCCAAGAATGGGTATTCGTCATAGTGGTTCAGCAGGAATGCTTGTTTCAGGAGTTGAGGCTCAAATAGTCAGTGTGGATACGTTGAAGCCCCTCCCTCCTCATCAGTTGGGTGAGATATGGGTACGGGGTCCTAATATGATGAAAGGTTATTACAACAATCCACAGGCCACCAGCTTAACTATAGATAAAATGGGATGGGTGCATACAGGAGATCTTGGATATTTTGATGAGGAAGGGCAACTTTATGTTGTTGACCGTATCAAAGAACTCATCAAGTATAAAGGTTTTCAGGTTGCACCAGCAGAACTTGAAGGACTTCTTGTCTCTCACCCTGAGATATTGGATGCTGTTGTCATCCCATATCCTGATGCTGAGGCTGGTGAGGTGCCTGTTGCCTATGTTGTACGTTCTCCCAATAGTTCACTGACTGAAGAAGACATCCAGAAGTTTATTGCTGATCAGGTTTCACCTTACAAAAGATTGCGAAGGGTGACATTCATCAACGCTGTTCCTAAGACAGCTTCTGGAAAAATTCTGAGAAGAGTGCTTATTGAGAAAGCACGATCCAAAATATGA 1770 0.4362 MIREIIRLRNFRVKIIWRKKQSEEEDNKKTIQATPLFLFVPSRRKTTMQRSGYGRDGIYRSLRPPPSIPTNQNLSLVSFLFTNVSSFPTKPALIDSDTSQSLSFSQLKSLVVKASHGFRNLGISKNDVVLLFSPNTILYPICFLAVTAIGAVVSTANPIYTVAEISKQIKDSNPKLVITVPELWDKVKNFNLPSLILGSQIDSSVLSDSKITTFDGLLGLGGSHTEFPASDVKQNDTAALLYSSGTTGVSKGVILTHRNFIAAALMIGMDDELANERHDVLLCVLPMFHIFGLAVITYAQLQRGNAVVSMRKFEFEMMVKVVEKYSVTRLWVVPPIILALAKQSVVKKYNLSSLKHIGSGAAPLGKDLMEECAKNFPQTLVMQGYGMTETCGIVSVENPRMGIRHSGSAGMLVSGVEAQIVSVDTLKPLPPHQLGEIWVRGPNMMKGYYNNPQATSLTIDKMGWVHTGDLGYFDEEGQLYVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEEDIQKFIADQVSPYKRLRRVTFINAVPKTASGKILRRVLIEKARSKI 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0344 589 Pfam AMP-binding enzyme 82 491 IPR000873 -
Mibi07g0344 589 SUPERFAMILY Acetyl-CoA synthetase-like 67 587 - -
Mibi07g0344 589 FunFam 4-coumarate--CoA ligase 2 487 588 - -
Mibi07g0344 589 Gene3D - 57 486 IPR042099 -
Mibi07g0344 589 ProSitePatterns Putative AMP-binding domain signature. 240 251 IPR020845 -
Mibi07g0344 589 Gene3D - 487 588 IPR045851 -
Mibi07g0344 589 FunFam Long-chain-fatty-acid--CoA ligase FadD 63 486 - -
Mibi07g0344 589 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 56 584 - -
Mibi07g0344 589 CDD 4CL 68 581 - -
Mibi07g0344 589 Pfam AMP-binding enzyme C-terminal domain 500 575 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0344 Mibi-ChrMibi07 4290730 4293996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g0344 48 589 Monolignol Biosynthesis Gene Families AT4G05160 70.404 0.0 807